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外显子组测序将PARN和RTEL1基因的突变与家族性肺纤维化及端粒缩短联系起来。

Exome sequencing links mutations in PARN and RTEL1 with familial pulmonary fibrosis and telomere shortening.

作者信息

Stuart Bridget D, Choi Jungmin, Zaidi Samir, Xing Chao, Holohan Brody, Chen Rui, Choi Mihwa, Dharwadkar Pooja, Torres Fernando, Girod Carlos E, Weissler Jonathan, Fitzgerald John, Kershaw Corey, Klesney-Tait Julia, Mageto Yolanda, Shay Jerry W, Ji Weizhen, Bilguvar Kaya, Mane Shrikant, Lifton Richard P, Garcia Christine Kim

机构信息

1] Eugene McDermott Center for Human Growth and Development, University of Texas Southwestern Medical Center, Dallas, Texas, USA. [2] Department of Pediatrics, University of Texas Southwestern Medical Center, Dallas, Texas, USA.

1] Department of Genetics, Yale School of Medicine, New Haven, Connecticut, USA. [2] Howard Hughes Medical Institute, Yale School of Medicine, New Haven, Connecticut, USA.

出版信息

Nat Genet. 2015 May;47(5):512-7. doi: 10.1038/ng.3278. Epub 2015 Apr 13.

Abstract

Idiopathic pulmonary fibrosis (IPF) is an age-related disease featuring progressive lung scarring. To elucidate the molecular basis of IPF, we performed exome sequencing of familial kindreds with pulmonary fibrosis. Gene burden analysis comparing 78 European cases and 2,816 controls implicated PARN, an exoribonuclease with no previous connection to telomere biology or disease, with five new heterozygous damaging mutations in unrelated cases and none in controls (P = 1.3 × 10(-8)); mutations were shared by all affected relatives (odds in favor of linkage = 4,096:1). RTEL1, an established locus for dyskeratosis congenita, harbored significantly more new damaging and missense variants at conserved residues in cases than in controls (P = 1.6 × 10(-6)). PARN and RTEL1 mutation carriers had shortened leukocyte telomere lengths, and we observed epigenetic inheritance of short telomeres in family members. Together, these genes explain ~7% of familial pulmonary fibrosis and strengthen the link between lung fibrosis and telomere dysfunction.

摘要

特发性肺纤维化(IPF)是一种与年龄相关的疾病,其特征为进行性肺瘢痕形成。为了阐明IPF的分子基础,我们对患有肺纤维化的家族亲属进行了外显子组测序。基因负担分析比较了78例欧洲病例和2816例对照,结果表明PARN(一种此前与端粒生物学或疾病无关联的外切核糖核酸酶)在无关病例中有5个新的杂合性有害突变,而对照中无此类突变(P = 1.3 × 10⁻⁸);所有受影响的亲属都有这些突变(连锁优势比 = 4096:1)。RTEL1是先天性角化不良的一个既定基因座,与对照相比,病例中保守残基处的新有害和错义变异显著更多(P = 1.6 × 10⁻⁶)。PARN和RTEL1突变携带者的白细胞端粒长度缩短,并且我们在家庭成员中观察到了短端粒的表观遗传遗传。这些基因共同解释了约7%的家族性肺纤维化,并加强了肺纤维化与端粒功能障碍之间的联系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9907/4414891/a451e05f53fb/nihms673360f1.jpg

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