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一种新型 DNA 生物传感器,使用一种二茂铁嵌入剂,应用于废水中人类群体生物标志物的潜在检测。

A novel DNA biosensor using a ferrocenyl intercalator applied to the potential detection of human population biomarkers in wastewater.

机构信息

†Department of Chemistry, University of Bath, Claverton Down, BA2 7AY, Bath, United Kingdom.

‡Department of Electronic and Electrical Engineering, University of Bath, Claverton Down, BA2 7AY, Bath, United Kingdom.

出版信息

Environ Sci Technol. 2015 May 5;49(9):5609-17. doi: 10.1021/acs.est.5b00637. Epub 2015 Apr 23.

Abstract

A new label-free electrochemical DNA (E-DNA) biosensor using a custom synthesized ferrocenyl (Fc) double-stranded DNA intercalator as a redox marker is presented. Single-stranded DNA (ssDNA) was co-immobilized on gold electrodes with 6-mecarpto-hexanol to control the surface density of the ssDNA probe, and hybridized with complementary DNA. The binding of the Fc intercalator to dsDNA was measured by differential pulse voltammetry. This new biosensor was optimized to allow the detection of single base pair mismatched sequences, able to detect as low as 10 pM target ssDNA with a dynamic range from 10 pM to 100 nM. DNA extracted from wastewater was analyzed by quantitative polymerase chain reaction targeting human-specific mitochondrial DNA (mtDNA). The aim of this approach is to enable the analysis of population biomarkers in wastewater for the evaluation of public health using wastewater-based epidemiology (WBE). The E-DNA biosensor was employed to detect human-specific mtDNA from wastewater before and after PCR amplification. The results demonstrate the feasibility of detecting human DNA biomarkers in wastewater using the developed biosensor, which may allow the further development of DNA population biomarkers for public health using WBE.

摘要

提出了一种新的无标记电化学 DNA(E-DNA)生物传感器,使用定制合成的二茂铁(Fc)双链 DNA 嵌入剂作为氧化还原标记物。单链 DNA(ssDNA)与 6-巯基己醇一起共固定在金电极上,以控制 ssDNA 探针的表面密度,并与互补 DNA 杂交。通过差分脉冲伏安法测量 Fc 嵌入剂与 dsDNA 的结合。对这种新的生物传感器进行了优化,以允许检测单碱基对错配序列,能够检测低至 10 pM 的目标 ssDNA,动态范围为 10 pM 至 100 nM。通过针对人特异性线粒体 DNA(mtDNA)的定量聚合酶链反应分析从废水提取的 DNA。该方法的目的是能够使用基于废水的流行病学(WBE)分析废水中的人群生物标志物,以评估公共健康。在 PCR 扩增前后,使用 E-DNA 生物传感器检测废水中的人特异性 mtDNA。结果表明,使用开发的生物传感器检测废水中人类 DNA 生物标志物是可行的,这可能允许进一步开发基于 WBE 的公共卫生人群生物标志物。

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