Metts Brittney, Thatcher Sean, Lewis Eboni, Karounos Mike, Cassis Lisa, Smith Rebecca, Lodder Robert A
Department of Chemistry, University of Kentucky, USA.
Graduate Center for Nutritional Sciences, University of Kentucky, USA.
J Dev Drugs. 2013 Oct;2(2). doi: 10.4172/2329-6631.1000107.
Computational models of complex systems, such as signaling networks and biological systems, can be used to explain the behavior of such systems under various conditions. The large number of integrated processes and variables, and the nonlinearities inherent in the fundamental processes, make it difficult for scientists unassisted by computer simulations to effectively predict the consequences of a particular intervention. For this reason, computer simulation has become an important tool for generating hypotheses about the behavior of these systems that can then be tested in the laboratory and clinic. A dynamic data-driven application simulation (DDDAS) was designed by Biospherics to model complex metabolic disease pathways by testing potential binary therapies in simulations at various combinations of two points in the pathways. Since DDDAS chooses the most effective pair-wise combinations, this data-driven system allows for the implementation of real-time data to model or predict a measurement or event. By incorporating data dynamically rather than statically, the predictions and measurements become more reliable. Dyslipidemia, a common precursor to atherosclerosis, can be manifested by high triglycerides, increased apolipoprotein (Apo) B, high levels of LDL, and low levels of HDL. SPX106 and D-tagatose is a combination drug therapy composed of a carbohydrate (D-tagatose) and SPX106. D-tagatose has been studied for the treatment of diabetes for several years, and has the ability to lower blood insulin levels and to decrease glycogen formation. SPX106 is a natural substance that accelerates lipid catabolism and inhibits dyslipidemia. In apolipoprotein E knockout mice (ApoE), this drug combination has been shown to significantly lower both the amount of atherosclerosis and blood cholesterol levels. This study used 26 male ApoE mice (n=13 in each group, control and treated). The control group received the normal "Western" diet (Harlan TD88137) and the treatment group received a modified version in which the sucrose was replaced with D-tagatose and 1g of SPX106 was added for every kilogram of chow. Mice were fed the diet for 8 weeks and then sacrificed via cardiac puncture. Blood serum was analyzed for cholesterol concentration. A significant difference was observed between the control and treated groups for total cholesterol levels. FPLC separations were done on fractions from both control and treated groups. A significant difference between VLDL and HDL levels was found between the treated and control mice (p<0.05 for both). Aortas were also taken and preserved in formalin to be quantified for atherosclerosis. Aortic sinuses were frozen in OCT and sectioned using a cryostat and then quantified for atherosclerosis. Treated mice showed statistically significant reduction in atherosclerosis in the aortic arch (p<0.01), the thoracic aorta (p<0.05), and the aortic sinus (p<0.05) as well as a reduction of cholesterol (p<0.05).
复杂系统的计算模型,如信号网络和生物系统,可用于解释此类系统在各种条件下的行为。大量的综合过程和变量,以及基本过程中固有的非线性,使得没有计算机模拟辅助的科学家很难有效地预测特定干预的后果。因此,计算机模拟已成为生成关于这些系统行为的假设的重要工具,这些假设随后可在实验室和临床中进行测试。生物球公司设计了一种动态数据驱动的应用模拟(DDDAS),通过在途径中两个点的各种组合的模拟中测试潜在的二元疗法,来模拟复杂的代谢疾病途径。由于DDDAS选择最有效的成对组合,这个数据驱动的系统允许实施实时数据来模拟或预测测量或事件。通过动态而非静态地纳入数据,预测和测量变得更加可靠。血脂异常是动脉粥样硬化的常见先兆,可表现为高甘油三酯、载脂蛋白(Apo)B增加、低密度脂蛋白水平高和高密度脂蛋白水平低。SPX106和D-塔格糖是一种由碳水化合物(D-塔格糖)和SPX106组成的联合药物疗法。D-塔格糖已经被研究用于治疗糖尿病数年,并且有降低血液胰岛素水平和减少糖原形成的能力。SPX106是一种加速脂质分解代谢并抑制血脂异常的天然物质。在载脂蛋白E基因敲除小鼠(ApoE)中,这种药物组合已被证明能显著降低动脉粥样硬化的程度和血液胆固醇水平。本研究使用了26只雄性ApoE小鼠(每组n = 13只, 对照组和治疗组)。对照组接受正常的“西方”饮食(Harlan TD88137),治疗组接受改良版饮食,其中蔗糖被D-塔格糖取代,每千克食物中添加1克SPX106。小鼠喂食该饮食8周,然后通过心脏穿刺处死。分析血清中的胆固醇浓度。在对照组和治疗组之间观察到总胆固醇水平存在显著差异。对对照组和治疗组的组分进行了快速蛋白质液相色谱(FPLC)分离。在治疗组和对照组小鼠之间发现极低密度脂蛋白(VLDL)和高密度脂蛋白(HDL)水平存在显著差异(两者p < 0.05)。还取出主动脉并保存在福尔马林中以对动脉粥样硬化进行定量。将主动脉窦冷冻在最佳切割温度(OCT)化合物中,使用低温恒温器切片,然后对动脉粥样硬化进行定量。治疗组小鼠的主动脉弓(p < 0.01)、胸主动脉(p < 0.05)和主动脉窦(p < 0.05)的动脉粥样硬化在统计学上显著降低,同时胆固醇也有所降低(p < 0.05)。