Logue Mark W, Smith Alicia K, Baldwin Clinton, Wolf Erika J, Guffanti Guia, Ratanatharathorn Andrew, Stone Annjanette, Schichman Steven A, Humphries Donald, Binder Elisabeth B, Arloth Janine, Menke Andreas, Uddin Monica, Wildman Derek, Galea Sandro, Aiello Allison E, Koenen Karestan C, Miller Mark W
Research Service, VA Boston Healthcare System, Boston, MA, United States; Biomedical Genetics, Boston University School of Medicine, Boston, MA, United States; Department of Biostatistics, Boston University School of Public Health, Boston, MA, United States.
Department of Psychiatry & Behavioral Sciences Emory University School of Medicine, Atlanta, GA, United States.
Psychoneuroendocrinology. 2015 Jul;57:1-13. doi: 10.1016/j.psyneuen.2015.03.016. Epub 2015 Mar 24.
We examined the association between posttraumatic stress disorder (PTSD) and gene expression using whole blood samples from a cohort of trauma-exposed white non-Hispanic male veterans (115 cases and 28 controls). 10,264 probes of genes and gene transcripts were analyzed. We found 41 that were differentially expressed in PTSD cases versus controls (multiple-testing corrected p<0.05). The most significant was DSCAM, a neurological gene expressed widely in the developing brain and in the amygdala and hippocampus of the adult brain. We then examined the 41 differentially expressed genes in a meta-analysis using two replication cohorts and found significant associations with PTSD for 7 of the 41 (p<0.05), one of which (ATP6AP1L) survived multiple-testing correction. There was also broad evidence of overlap across the discovery and replication samples for the entire set of genes implicated in the discovery data based on the direction of effect and an enrichment of p<0.05 significant probes beyond what would be expected under the null. Finally, we found that the set of differentially expressed genes from the discovery sample was enriched for genes responsive to glucocorticoid signaling with most showing reduced expression in PTSD cases compared to controls.
我们使用来自一组遭受创伤的非西班牙裔白人男性退伍军人(115例病例和28例对照)的全血样本,研究了创伤后应激障碍(PTSD)与基因表达之间的关联。分析了10264个基因和基因转录本的探针。我们发现41个在PTSD病例与对照中差异表达(多重检验校正p<0.05)。最显著的是DSCAM,一种在发育中的大脑以及成人大脑的杏仁核和海马体中广泛表达的神经学基因。然后,我们在一项荟萃分析中使用两个重复队列检查了这41个差异表达基因,发现41个中有7个与PTSD存在显著关联(p<0.05),其中一个(ATP6AP1L)在多重检验校正后仍然显著。基于效应方向以及p<0.05显著探针的富集超过了零假设下预期的情况,在发现数据中涉及的整个基因集的发现样本和重复样本之间也有广泛的重叠证据。最后,我们发现发现样本中的差异表达基因集富含对糖皮质激素信号有反应的基因,与对照相比,大多数在PTSD病例中表达降低。