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全基因组关联研究提示一个新的 RNA 基因 lincRNA AC068718.1 是女性创伤后应激障碍的风险因素。

Genome-wide association study implicates a novel RNA gene, the lincRNA AC068718.1, as a risk factor for post-traumatic stress disorder in women.

机构信息

Department of Psychiatry, Columbia University, New York State Psychiatric Institute, New York, NY, USA.

出版信息

Psychoneuroendocrinology. 2013 Dec;38(12):3029-38. doi: 10.1016/j.psyneuen.2013.08.014. Epub 2013 Sep 8.

DOI:10.1016/j.psyneuen.2013.08.014
PMID:24080187
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3844079/
Abstract

Posttraumatic stress disorder (PTSD) is a common and debilitating mental disorder with a particularly high burden for women. Emerging evidence suggests PTSD may be more heritable among women and evidence from animal models and human correlational studies suggest connections between sex-linked biology and PTSD vulnerability, which may extend to the disorder's genetic architecture. We conducted a genome-wide association study (GWAS) of PTSD in a primarily African American sample of women from the Detroit Neighborhood Health Study (DNHS) and tested for replication in an independent cohort of primarily European American women from the Nurses Health Study II (NHSII). We genotyped 413 DNHS women - 94 PTSD cases and 319 controls exposed to at least one traumatic event - on the Illumina HumanOmniExpress BeadChip for >700,000 markers and tested 578 PTSD cases and 1963 controls from NHSII for replication. We performed a network-based analysis integrating data from GWAS-derived independent regions of association and the Reactome database of functional interactions. We found genome-wide significant association for one marker mapping to a novel RNA gene, lincRNA AC068718.1, for which we found suggestive evidence of replication in NHSII. Our network-based analysis indicates that our top GWAS results were enriched for pathways related to telomere maintenance and immune function. Our findings implicate a novel RNA gene, lincRNA AC068718.1, as risk factor for PTSD in women and add to emerging evidence that non-coding RNA genes may play a crucial role in shaping the landscape of gene regulation with putative pathological effects that lead to phenotypic differences.

摘要

创伤后应激障碍(PTSD)是一种常见且使人衰弱的精神障碍,对女性的负担尤其沉重。新出现的证据表明,PTSD 在女性中可能具有更高的遗传性,并且来自动物模型和人类相关研究的证据表明,性别相关生物学与 PTSD 易感性之间存在联系,这种联系可能扩展到该疾病的遗传结构。我们对来自底特律社区健康研究(DNHS)的主要是非洲裔美国女性样本进行了 PTSD 的全基因组关联研究(GWAS),并在主要是欧洲裔美国女性的独立队列护士健康研究 II(NHSII)中进行了复制测试。我们对 413 名 DNHS 女性进行了基因分型,其中 94 名 PTSD 病例和 319 名暴露于至少一次创伤性事件的对照者,这些女性使用 Illumina HumanOmniExpress BeadChip 进行了超过 700,000 个标记物的基因分型,并对 NHSII 中的 578 名 PTSD 病例和 1963 名对照者进行了复制测试。我们进行了基于网络的分析,整合了来自 GWAS 衍生的独立关联区域和功能相互作用的 Reactome 数据库的数据。我们发现一个标记物映射到一个新的 RNA 基因 lincRNA AC068718.1,该标记物与全基因组显著相关,我们在 NHSII 中发现了该标记物具有复制的提示性证据。我们的基于网络的分析表明,我们的 GWAS 结果的顶端富集了与端粒维持和免疫功能相关的途径。我们的研究结果表明,一个新的 RNA 基因 lincRNA AC068718.1 是女性 PTSD 的危险因素,并增加了新的证据表明,非编码 RNA 基因可能在塑造基因调控景观方面发挥关键作用,其潜在的病理效应导致表型差异。

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ADCYAP1R1 genotype associates with post-traumatic stress symptoms in highly traumatized African-American females.ADCYAP1R1 基因型与高度创伤的非裔美国女性创伤后应激症状相关。
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PAC1 receptor (ADCYAP1R1) genotype is associated with PTSD's emotional numbing symptoms in Chinese earthquake survivors.PAC1 受体(ADCYAP1R1)基因型与中国地震幸存者创伤后应激障碍的情感麻木症状有关。
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