Jin Sheng Chih, Carrasquillo Minerva M, Benitez Bruno A, Skorupa Tara, Carrell David, Patel Dwani, Lincoln Sarah, Krishnan Siddharth, Kachadoorian Michaela, Reitz Christiane, Mayeux Richard, Wingo Thomas S, Lah James J, Levey Allan I, Murrell Jill, Hendrie Hugh, Foroud Tatiana, Graff-Radford Neill R, Goate Alison M, Cruchaga Carlos, Ertekin-Taner Nilüfer
Department of Psychiatry, Washington University School of Medicine, 660 South Euclid Avenue B8134, St. Louis, MO, 63110, USA.
Department of Neuroscience, Mayo Clinic, 4500 San Pablo Road, Jacksonville, FL, 32224, USA.
Mol Neurodegener. 2015 Apr 10;10:19. doi: 10.1186/s13024-015-0016-9.
TREM2 encodes for triggering receptor expressed on myeloid cells 2 and has rare, coding variants that associate with risk for late-onset Alzheimer's disease (LOAD) in Caucasians of European and North-American origin. This study evaluated the role of TREM2 in LOAD risk in African-American (AA) subjects. We performed exonic sequencing and validation in two independent cohorts of >800 subjects. We selected six coding variants (p.R47H, p.R62H, p.D87N, p.E151K, p.W191X, and p.L211P) for case-control analyses in a total of 906 LOAD cases vs. 2,487 controls.
We identified significant LOAD risk association with p.L211P (p=0.01, OR=1.27, 95%CI=1.05-1.54) and suggestive association with p.W191X (p=0.08, OR=1.35, 95%CI=0.97-1.87). Conditional analysis suggests that p.L211P, which is in linkage disequilibrium with p.W191X, may be the stronger variant of the two, but does not rule out independent contribution of the latter. TREM2 p.L211P resides within the cytoplasmic domain and p.W191X is a stop-gain mutation within the shorter TREM-2V transcript. The coding variants within the extracellular domain of TREM2 previously shown to confer LOAD risk in Caucasians were extremely rare in our AA cohort and did not associate with LOAD risk.
Our findings suggest that TREM2 coding variants also confer LOAD risk in AA, but implicate variants within different regions of the gene than those identified for Caucasian subjects. These results underscore the importance of investigating different ethnic populations for disease risk variant discovery, which may uncover allelic heterogeneity with potentially diverse mechanisms of action.
TREM2编码髓系细胞上表达的触发受体2,具有罕见的编码变异,这些变异与欧洲和北美血统的白种人中晚发性阿尔茨海默病(LOAD)的风险相关。本研究评估了TREM2在非裔美国人(AA)受试者患LOAD风险中的作用。我们在两个独立的超过800名受试者的队列中进行了外显子测序和验证。我们选择了六个编码变异(p.R47H、p.R62H、p.D87N、p.E151K、p.W191X和p.L211P),在总共906例LOAD病例与2487例对照中进行病例对照分析。
我们发现p.L211P与LOAD风险存在显著关联(p = 0.01,OR = 1.27,95%CI = 1.05 - 1.54),p.W191X存在提示性关联(p = 0.08,OR = 1.35,95%CI = 0.97 - 1.87)。条件分析表明,与p.W191X处于连锁不平衡状态的p.L211P可能是两者中更强的变异,但不排除后者的独立作用。TREM2 p.L211P位于细胞质结构域内,p.W191X是较短的TREM - 2V转录本中的一个终止密码子获得突变。先前显示在白种人中赋予LOAD风险的TREM2细胞外结构域内的编码变异在我们的AA队列中极其罕见,且与LOAD风险无关。
我们的研究结果表明,TREM2编码变异在AA中也赋予LOAD风险,但涉及的基因区域变异与在白种人受试者中鉴定出的不同。这些结果强调了调查不同种族人群以发现疾病风险变异的重要性,这可能揭示具有潜在不同作用机制的等位基因异质性。