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Genome-wide analysis in Plasmodium falciparum reveals early and late phases of RNA polymerase II occupancy during the infectious cycle.恶性疟原虫的全基因组分析揭示了感染周期中RNA聚合酶II占据的早期和晚期阶段。
BMC Genomics. 2014 Nov 6;15(1):959. doi: 10.1186/1471-2164-15-959.
2
Exonuclease-mediated degradation of nascent RNA silences genes linked to severe malaria.外切核酸酶介导的新生 RNA 降解使与严重疟疾相关的基因沉默。
Nature. 2014 Sep 18;513(7518):431-5. doi: 10.1038/nature13468. Epub 2014 Jun 29.
3
Noncoding RNAs as emerging regulators of Plasmodium falciparum virulence gene expression.非编码RNA作为恶性疟原虫毒力基因表达的新兴调节因子。
Curr Opin Microbiol. 2014 Aug;20:153-61. doi: 10.1016/j.mib.2014.06.013. Epub 2014 Jul 12.
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Parasite physiology: RNase silences Plasmodium antigens.
Nat Rev Microbiol. 2014 Aug;12(8):531. doi: 10.1038/nrmicro3317. Epub 2014 Jul 7.
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Transcription is initiated on silent variant surface glycoprotein expression sites despite monoallelic expression in Trypanosoma brucei.尽管在布氏锥虫中仅单等位基因表达,但转录仍在沉默的表面糖蛋白表达位点起始。
Proc Natl Acad Sci U S A. 2014 Jun 17;111(24):8943-8. doi: 10.1073/pnas.1404873111. Epub 2014 Jun 2.
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Silence, activate, poise and switch! Mechanisms of antigenic variation in Plasmodium falciparum.静默、激活、平衡和转换!疟原虫抗原变异的机制。
Cell Microbiol. 2013 May;15(5):718-26. doi: 10.1111/cmi.12115. Epub 2013 Feb 21.
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Rrp6 is recruited to transcribed genes and accompanies the spliced mRNA to the nuclear pore.Rrp6 被招募到转录基因,并伴随剪接的 mRNA 进入核孔。
RNA. 2012 Aug;18(8):1466-74. doi: 10.1261/rna.032045.111. Epub 2012 Jun 28.
8
Transcriptional variation in the malaria parasite Plasmodium falciparum.疟原虫恶性疟原虫的转录变异。
Genome Res. 2012 May;22(5):925-38. doi: 10.1101/gr.129692.111. Epub 2012 Mar 13.
9
A critical role of perinuclear filamentous actin in spatial repositioning and mutually exclusive expression of virulence genes in malaria parasites.核周丝状肌动蛋白在疟原虫毒力基因空间重定位和相互排斥表达中的关键作用。
Cell Host Microbe. 2011 Nov 17;10(5):451-63. doi: 10.1016/j.chom.2011.09.013.
10
In silico and biological survey of transcription-associated proteins implicated in the transcriptional machinery during the erythrocytic development of Plasmodium falciparum.利用生物信息学和生物学方法,对参与疟原虫红细胞发育过程中转录机制的转录相关蛋白进行研究。
BMC Genomics. 2010 Jan 15;11:34. doi: 10.1186/1471-2164-11-34.

核糖核酸酶II:新角色登场。

RNase II: A new player enters the game.

作者信息

Zhang Qingfeng, Scherf Artur

机构信息

a Research Center for Translational Medicine; Key Laboratory of Arrhythmias of the Ministry of Education; Shanghai East Hospital; Tongji University School of Medicine ; Shanghai , China.

出版信息

RNA Biol. 2015;12(6):586-9. doi: 10.1080/15476286.2015.1038013.

DOI:10.1080/15476286.2015.1038013
PMID:25892118
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4615643/
Abstract

Malaria is caused by a unicellular protozoan pathogen of the genus Plasmodium. Although genes represent monocistronic units that are expressed in a life cycle stage-specific manner, post-transcriptional regulation via translational repression of mRNA has been observed in parasite stages that transition from the vertebrate host to the Anopheles vector. An interesting new type of post-transcriptional control was recently discovered in Plasmodium falciparum stages that infect human erythrocytes. A subgroup of genes that were thought to be transcriptionally silent are actually transcribed but degraded immediately by an RNase II that is recruited to these gene loci. This cryptic RNA is not detectable in steady-state RNA but has been detected using nuclear run-on techniques and in mutant RNase II parasites. Nascent RNA degradation controls virulence genes expressed in a monoallelic fashion and noncoding RNAs (ncRNAs), but also a number of housekeeping-like of genes. More studies on other life cycle stages may reveal the full extent of this type of gene regulation in malaria parasites. It is tempting to speculate that RNase II-mediated gene control may exist in other eukaryotic organisms.

摘要

疟疾由疟原虫属的单细胞原生动物病原体引起。尽管基因代表以生命周期阶段特异性方式表达的单顺反子单元,但在从脊椎动物宿主过渡到按蚊载体的寄生虫阶段,已观察到通过mRNA翻译抑制进行的转录后调控。最近在感染人类红细胞的恶性疟原虫阶段发现了一种有趣的新型转录后控制。一组被认为转录沉默的基因实际上被转录,但会立即被招募到这些基因位点的核糖核酸酶II降解。这种隐蔽RNA在稳态RNA中无法检测到,但已通过核延伸技术在突变核糖核酸酶II寄生虫中检测到。新生RNA降解控制以单等位基因方式表达的毒力基因和非编码RNA(ncRNA),以及一些类似管家基因的基因。对其他生命周期阶段的更多研究可能会揭示疟原虫中这种基因调控的全貌。很容易推测核糖核酸酶II介导的基因控制可能存在于其他真核生物中。