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芦笋嫩茎作为研究次生壁发育过程中杂木聚糖生物合成的模型。

Asparagus Spears as a Model to Study Heteroxylan Biosynthesis during Secondary Wall Development.

作者信息

Song Lili, Zeng Wei, Wu Aimin, Picard Kelsey, Lampugnani Edwin R, Cheetamun Roshan, Beahan Cherie, Cassin Andrew, Lonsdale Andrew, Doblin Monika S, Bacic Antony

机构信息

Nurturing Station for the State Key Laboratory of Subtropical Silviculture, Zhejiang A & F University, Lin'an, Hangzhou, 311300, P. R. China; ARC Centre of Excellence in Plant Cell Walls, School of Botany, the University of Melbourne, Parkville, VIC 3010, Australia.

ARC Centre of Excellence in Plant Cell Walls, School of Botany, the University of Melbourne, Parkville, VIC 3010, Australia.

出版信息

PLoS One. 2015 Apr 20;10(4):e0123878. doi: 10.1371/journal.pone.0123878. eCollection 2015.

Abstract

Garden asparagus (Asparagus officinalis L.) is a commercially important crop species utilized for its excellent source of vitamins, minerals and dietary fiber. However, after harvest the tissue hardens and its quality rapidly deteriorates because spear cell walls become rigidified due to lignification and substantial increases in heteroxylan content. This latter observation prompted us to investigate the in vitro xylan xylosyltransferase (XylT) activity in asparagus. The current model system for studying heteroxylan biosynthesis, Arabidopsis, whilst a powerful genetic system, displays relatively low xylan XylT activity in in vitro microsomal preparations compared with garden asparagus therefore hampering our ability to study the molecular mechanism(s) of heteroxylan assembly. Here, we analyzed physiological and biochemical changes of garden asparagus spears stored at 4 °C after harvest and detected a high level of xylan XylT activity that accounts for this increased heteroxylan. The xylan XylT catalytic activity is at least thirteen-fold higher than that reported for previously published species, including Arabidopsis and grasses. A biochemical assay was optimized and up to seven successive Xyl residues were incorporated to extend the xylotetraose (Xyl4) acceptor backbone. To further elucidate the xylan biosynthesis mechanism, we used RNA-seq to generate an Asparagus reference transcriptome and identified five putative xylan biosynthetic genes (AoIRX9, AoIRX9-L, AoIRX10, AoIRX14_A, AoIRX14_B) with AoIRX9 having an expression profile that is distinct from the other genes. We propose that Asparagus provides an ideal biochemical system to investigate the biochemical aspects of heteroxylan biosynthesis and also offers the additional benefit of being able to study the lignification process during plant stem maturation.

摘要

绿芦笋(Asparagus officinalis L.)是一种具有重要商业价值的作物品种,因其富含维生素、矿物质和膳食纤维而被广泛利用。然而,收获后芦笋组织会变硬,品质迅速下降,这是因为笋茎细胞壁由于木质化和杂木聚糖含量大幅增加而变得僵硬。后一观察结果促使我们研究芦笋中木聚糖木糖基转移酶(XylT)的体外活性。目前用于研究杂木聚糖生物合成的模式系统拟南芥,虽然是一个强大的遗传系统,但与绿芦笋相比,其体外微粒体制备中的木聚糖XylT活性相对较低,因此阻碍了我们研究杂木聚糖组装分子机制的能力。在此,我们分析了收获后在4°C下储存的绿芦笋笋茎的生理和生化变化,并检测到高水平的木聚糖XylT活性,这解释了杂木聚糖含量的增加。木聚糖XylT催化活性比之前报道的包括拟南芥和禾本科植物在内的物种至少高13倍。优化了生化测定方法,并连续掺入多达七个木糖残基以延长木四糖(Xyl4)受体主链。为了进一步阐明木聚糖生物合成机制,我们使用RNA测序生成了芦笋参考转录组,并鉴定了五个假定的木聚糖生物合成基因(AoIRX9、AoIRX9-L、AoIRX10、AoIRX14_A、AoIRX14_B),其中AoIRX9的表达谱与其他基因不同。我们认为,芦笋为研究杂木聚糖生物合成的生化方面提供了一个理想的生化系统,并且还具有能够研究植物茎成熟过程中木质化过程的额外优势。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aa41/4404143/a685a107e56d/pone.0123878.g001.jpg

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