Lin Ping-Chang
Department of Radiology, College of Medicine, Howard University, 2041 Georgia Ave, N.W., Washington, DC, 20060, USA,
J Biomol NMR. 2015 Jun;62(2):121-7. doi: 10.1007/s10858-015-9929-4. Epub 2015 Apr 22.
A number of NMR methods possess the capability of probing chemical exchange dynamics in solution. However, certain drawbacks limit the applications of these NMR approaches, particularly, to a complex system. Here, we propose a procedure that integrates the regularized nonnegative least squares (NNLS) analysis of multiexponential T2 relaxation into Carr-Purcell-Meiboom-Gill (CPMG) relaxation dispersion experiments to probe chemical exchange in a multicompartmental system. The proposed procedure was validated through analysis of (19)F T2 relaxation data of 6-fluoro-DL-tryptophan in a two-compartment solution with and without bovine serum albumin. Given the regularized NNLS analysis of a T2 relaxation curve acquired, for example, at the CPMG frequency υ CPMG = 125, the nature of two distinct peaks in the associated T2 distribution spectrum indicated 6-fluoro-DL-tryptophan either retaining the free state, with geometric mean */multiplicative standard deviation (MSD) = 1851.2 ms */1.51, or undergoing free/albumin-bound interconversion, with geometric mean */MSD = 236.8 ms */1.54, in the two-compartment system. Quantities of the individual tryptophan species were accurately reflected by the associated T2 peak areas, with an interconversion state-to-free state ratio of 0.45 ± 0.11. Furthermore, the CPMG relaxation dispersion analysis estimated the exchange rate between the free and albumin-bound states in this fluorinated tryptophan analog and the corresponding dissociation constant of the fluorinated tryptophan-albumin complex in the chemical-exchanging, two-compartment system.
许多核磁共振(NMR)方法具备探测溶液中化学交换动力学的能力。然而,某些缺点限制了这些NMR方法的应用,尤其是在复杂体系中的应用。在此,我们提出一种程序,该程序将多指数T2弛豫的正则化非负最小二乘法(NNLS)分析整合到Carr-Purcell-Meiboom-Gill(CPMG)弛豫色散实验中,以探测多隔室系统中的化学交换。通过分析6-氟-DL-色氨酸在有和没有牛血清白蛋白的双隔室溶液中的(19)F T2弛豫数据,验证了所提出的程序。例如,对于在CPMG频率υCPMG = 125下采集的T2弛豫曲线进行正则化NNLS分析,相关T2分布谱中两个不同峰的性质表明,在双隔室系统中,6-氟-DL-色氨酸要么保持自由状态,几何平均值/乘性标准偏差(MSD)= 1851.2毫秒/1.51,要么经历自由/与白蛋白结合的相互转化,几何平均值/MSD = 236.8毫秒/1.54。各个色氨酸物种的数量由相关的T2峰面积准确反映,相互转化态与自由态的比率为0.45±0.11。此外,CPMG弛豫色散分析估计了这种氟化色氨酸类似物中自由态与白蛋白结合态之间的交换速率,以及在化学交换的双隔室系统中氟化色氨酸-白蛋白复合物的相应解离常数。