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烟曲霉中的铁摄取与氧化应激反应

Iron acquisition and oxidative stress response in aspergillus fumigatus.

作者信息

Brandon Madison, Howard Brad, Lawrence Christopher, Laubenbacher Reinhard

机构信息

Center for Cell Analysis and Modeling, University of Connecticut Health Center, 400 Farmington Ave, Farmington, 06030, USA.

Center for Quantitative Medicine, University of Connecticut Health Center, Farmington, 06030, USA.

出版信息

BMC Syst Biol. 2015 Apr 24;9:19. doi: 10.1186/s12918-015-0163-1.

Abstract

BACKGROUND

Aspergillus fumigatus is a ubiquitous airborne fungal pathogen that presents a life-threatening health risk to individuals with weakened immune systems. A. fumigatus pathogenicity depends on its ability to acquire iron from the host and to resist host-generated oxidative stress. Gaining a deeper understanding of the molecular mechanisms governing A. fumigatus iron acquisition and oxidative stress response may ultimately help to improve the diagnosis and treatment of invasive aspergillus infections.

RESULTS

This study follows a systems biology approach to investigate how adaptive behaviors emerge from molecular interactions underlying A. fumigatus iron regulation and oxidative stress response. We construct a Boolean network model from known interactions and simulate how changes in environmental iron and superoxide levels affect network dynamics. We propose rules for linking long term model behavior to qualitative estimates of cell growth and cell death. These rules are used to predict phenotypes of gene deletion strains. The model is validated on the basis of its ability to reproduce literature data not used in model generation.

CONCLUSIONS

The model reproduces gene expression patterns in experimental time course data when A. fumigatus is switched from a low iron to a high iron environment. In addition, the model is able to accurately represent the phenotypes of many knockout strains under varying iron and superoxide conditions. Model simulations support the hypothesis that intracellular iron regulates A. fumigatus transcription factors, SreA and HapX, by a post-translational, rather than transcriptional, mechanism. Finally, the model predicts that blocking siderophore-mediated iron uptake reduces resistance to oxidative stress. This indicates that combined targeting of siderophore-mediated iron uptake and the oxidative stress response network may act synergistically to increase fungal cell killing.

摘要

背景

烟曲霉是一种普遍存在的空气传播真菌病原体,对免疫系统较弱的个体构成危及生命的健康风险。烟曲霉的致病性取决于其从宿主获取铁以及抵抗宿主产生的氧化应激的能力。更深入地了解控制烟曲霉铁获取和氧化应激反应的分子机制,最终可能有助于改善侵袭性曲霉感染的诊断和治疗。

结果

本研究采用系统生物学方法,研究烟曲霉铁调节和氧化应激反应背后的分子相互作用如何产生适应性行为。我们根据已知的相互作用构建了一个布尔网络模型,并模拟环境铁和超氧化物水平的变化如何影响网络动态。我们提出了将长期模型行为与细胞生长和细胞死亡的定性估计联系起来的规则。这些规则用于预测基因缺失菌株的表型。该模型基于其重现模型生成中未使用的文献数据的能力进行了验证。

结论

当烟曲霉从低铁环境转变为高铁环境时,该模型在实验时间进程数据中重现了基因表达模式。此外,该模型能够准确代表许多基因敲除菌株在不同铁和超氧化物条件下的表型。模型模拟支持以下假设:细胞内铁通过翻译后而非转录机制调节烟曲霉转录因子SreA和HapX。最后,该模型预测阻断铁载体介导的铁摄取会降低对氧化应激的抗性。这表明联合靶向铁载体介导的铁摄取和氧化应激反应网络可能协同作用以增加真菌细胞杀伤。

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