Srinivas T N R, Anil Kumar P, Tank M, Sunil B, Poorna Manasa, Zareena Begum, Shivaji S
Centre for Cellular and Molecular Biology, Uppal Road, Hyderabad -500 007, India.
Leibniz-Institut für Meereswissenschaften, IFM-GEOMAR, Marine Mikrobiologie, Düsternbrooker Weg 20, D-24105Kiel, Germany.
Int J Syst Evol Microbiol. 2015 Aug;65(8):2391-2396. doi: 10.1099/ijs.0.000269. Epub 2015 Apr 23.
A novel Gram-stain-positive, coccoid, non-motile bacterium, designated strain AMV4T, was isolated from a soil sample collected from a mud volcano located in the Andaman Islands, India. The colony was pale orange. Strain AMV4T was positive for oxidase, aesculinase, lysine decarboxylase and ornithine decarboxylase activities and negative for amylase, catalase, cellulase, protease, urease and lipase activities. 16S rRNA gene sequence analysis indicated that strain AMV4T was a member of the order Actinomycetales and was closely related to Aquipuribacter hungaricus with a sequence similarity of 97.13% (pairwise alignment). Phylogenetic analyses showed that strain AMV4T clustered with Aquipuribacter hungaricus and was distantly related to the other genera of the family Intrasporangiaceae. DNA-DNA hybridization between strains AMV4T and Aquipuribacter hungaricus IV-75T showed a relatedness of 28%. The predominant cellular fatty acids were iso-C15 : 0 (6.9%), anteiso-C15 : 0 (25.3%), C16 : 0 (12.9%), anteiso-C16 : 0 (5.6%), C18 : 1ω9c (19.8%) and C18 : 3ω6,9,12c (9.1%). The diagnostic diamino acid in the cell-wall peptidoglycan of strain AMV4T was meso-diaminopimelic acid. Strain AMV4T contained MK-10(H4) as the predominant respiratory quinone. The polar lipids consisted of phosphatidylglycerol, one unidentified glycolipid, two unidentified phospholipids and five unidentified lipids. The DNA G+C content of strain AMV4T was 74.3 mol%. Based on data from this taxonomic study using a polyphasic approach, it is proposed that strain AMV4T represents a novel species of the genus Aquipuribacter, with the suggested name Aquipuribacter nitratireducens sp. nov. The type strain is AMV4T ( = CCUG 58430T = DSM 22863T = NBRC 107137T).
从印度安达曼群岛一座泥火山采集的土壤样本中分离出一株新型革兰氏阳性、球状、无运动性细菌,命名为菌株AMV4T。该菌落呈浅橙色。菌株AMV4T氧化酶、七叶苷酶、赖氨酸脱羧酶和鸟氨酸脱羧酶活性呈阳性,淀粉酶、过氧化氢酶、纤维素酶、蛋白酶、脲酶和脂肪酶活性呈阴性。16S rRNA基因序列分析表明,菌株AMV4T属于放线菌目,与匈牙利水栖杆菌密切相关,序列相似性为97.13%(两两比对)。系统发育分析表明,菌株AMV4T与匈牙利水栖杆菌聚类,与内孢囊菌科的其他属亲缘关系较远。菌株AMV4T与匈牙利水栖杆菌IV-75T之间的DNA-DNA杂交显示相关性为28%。主要细胞脂肪酸为异-C15 : 0(6.9%)、anteiso-C15 : 0(25.3%)、C16 : 0(12.9%)、anteiso-C16 : 0(5.6%)、C18 : 1ω9c(19.8%)和C18 : 3ω6,9,12c(9.1%)。菌株AMV4T细胞壁肽聚糖中的诊断性二氨基酸为内消旋二氨基庚二酸。菌株AMV4T以MK-10(H4)作为主要呼吸醌。极性脂质由磷脂酰甘油、一种未鉴定的糖脂、两种未鉴定的磷脂和五种未鉴定的脂质组成。菌株AMV4T的DNA G+C含量为74.3 mol%。基于多相分类研究的数据,建议菌株AMV4T代表水栖杆菌属的一个新物种,命名为硝酸盐还原水栖杆菌(Aquipuribacter nitratireducens sp. nov.)。模式菌株为AMV4T(=CCUG 58430T=DSM 22863T=NBRC 107137T)。