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嗜油普拉瑟氏菌新种,一种从受油污染的泥坑中分离出的嗜盐耐热原油降解放线菌。

Prauserella oleivorans sp. nov., a halophilic and thermotolerant crude-oil-degrading actinobacterium isolated from an oil-contaminated mud pit.

作者信息

Dastgheib Seyed Mohammad Mehdi, Tirandaz Hassan, Moshtaghi Nikou Mahdi, Ramezani Mohaddaseh, Shavandi Mahmoud, Amoozegar Mohammad Ali, Ventosa Antonio

机构信息

Microbiology and Biotechnology Research Group, Research Institute of Petroleum Industry, Tehran, Iran.

Microorganisms Bank, Iranian Biological Resource Centre (IBRC), ACECR Tehran, Iran.

出版信息

Int J Syst Evol Microbiol. 2017 Sep;67(9):3381-3386. doi: 10.1099/ijsem.0.002124. Epub 2017 Aug 31.

Abstract

A crude-oil-degrading, Gram-stain-positive actinobacterial strain, RIPIT, was isolated from a soil sample collected from an oil-contaminated mud pit in Khangiran oil and gas field, in the north-east of Iran. RIPIT was strictly aerobic, catalase- and oxidase-positive. The strain grew with 0-12.5 % (w/v) NaCl (optimum 3-5 %), at 25-55 °C (optimum 45 °C) and at pH 6.0-9.5 (optimum pH 7.0). The results of 16S rRNA gene sequence comparative analysis indicated that RIPIT represents a member of the genus Prauserella, with high phylogenetic similarity to Prauserella coralliicola SCSIO 11529T (97.5 %), Prauserella endophytica SP28S-3T (97.5 %) and Prauserella marina MS498T (97.2 %). DNA-DNA relatedness values between the novel strain and P. coralliicola DSM 45821T, P. endophytica DSM 46655T and P. marina DSM 45268T were 28 , 19 and 23 %, respectively. The cell wall peptidoglycan of RIPIT contained meso-diaminopimelic acid as the diamino acid and the whole-cell sugars are galactose and arabinose. The polar lipids pattern contained phosphatidylethanolamine, diphosphatidylglycerol, phosphatidylinositol and two unknown phospholipids. Its cellular fatty acids pattern consisted of C17 : 1ω6c, iso-C16 : 0 and summed feature 3 (C16 : 1ω7c and/or iso-C15 : 0 2-OH), and the major respiratory quinone was MK-9(H4). The G+C content of the genomic DNA was 69 mol%. On the basis of polyphasic taxonomic data we propose that RIPIT represents a novel species of the genus Prauserella, for which the name Prauserella oleivorans sp. nov. is proposed. The type strain of Prauserellaoleivorans is RIPIT (=IBRC-M 10906T=LMG 28389T).

摘要

从伊朗东北部Khangiran油气田受石油污染的泥坑采集的土壤样本中分离出一株原油降解革兰氏阳性放线菌菌株RIPIT。RIPIT严格需氧,过氧化氢酶和氧化酶呈阳性。该菌株在0 - 12.5%(w/v)NaCl(最适3 - 5%)、25 - 55℃(最适45℃)和pH 6.0 - 9.5(最适pH 7.0)条件下生长。16S rRNA基因序列比较分析结果表明,RIPIT属于普拉泽氏菌属,与珊瑚普拉泽氏菌SCSIO 11529T(97.5%)、内生普拉泽氏菌SP28S - 3T(97.5%)和海洋普拉泽氏菌MS498T(97.2%)具有高度系统发育相似性。该新菌株与珊瑚普拉泽氏菌DSM 45821T、内生普拉泽氏菌DSM 46655T和海洋普拉泽氏菌DSM 45268T的DNA - DNA相关性值分别为28%、19%和23%。RIPIT的细胞壁肽聚糖含有内消旋二氨基庚二酸作为二氨基酸,全细胞糖为半乳糖和阿拉伯糖。极性脂质模式包含磷脂酰乙醇胺、二磷脂酰甘油、磷脂酰肌醇和两种未知磷脂。其细胞脂肪酸模式由C17 : 1ω6c、异C16 : 0和总和特征3(C16 : 1ω7c和/或异C15 : 0 2 - OH)组成,主要呼吸醌为MK - 9(H4)。基因组DNA的G + C含量为69 mol%。基于多相分类学数据,我们提出RIPIT代表普拉泽氏菌属的一个新物种,命名为食油普拉泽氏菌(Prauserella oleivorans sp. nov.)。食油普拉泽氏菌的模式菌株为RIPIT(= IBRC - M 10906T = LMG 28389T)。

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