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辐射诱导的簇状非双链断裂损伤谱——蒙特卡罗径迹结构建模与计算

Spectrum of Radiation-Induced Clustered Non-DSB Damage - A Monte Carlo Track Structure Modeling and Calculations.

作者信息

Watanabe Ritsuko, Rahmanian Shirin, Nikjoo Hooshang

机构信息

a  Research Group for Radiation Effect Analysis, Japan Atomic Energy Agency, Tokai, Ibaraki, 319-1195, Japan.

出版信息

Radiat Res. 2015 May;183(5):525-40. doi: 10.1667/RR13902.1. Epub 2015 Apr 24.

Abstract

The aim of this report is to present the spectrum of initial radiation-induced cellular DNA damage [with particular focus on non-double-strand break (DSB) damage] generated by computer simulations. The radiation types modeled in this study were monoenergetic electrons (100 eV-1.5 keV), ultrasoft X-ray photons Ck, AlK and TiK, as well as some selected ions including 3.2 MeV/u proton; 0.74 and 2.4 MeV/u helium ions; 29 MeV/u nitrogen ions and 950 MeV/u iron ions. Monte Carlo track structure methods were used to simulate damage induction by these radiation types in a cell-mimetic condition from a single-track action. The simulations took into account the action of direct energy deposition events and the reaction of hydroxyl radicals on atomistic linear B-DNA segments of a few helical turns including the water of hydration. Our results permitted the following conclusions: a. The absolute levels of different types of damage [base damage, simple and complex single-strand breaks (SSBs) and DSBs] vary depending on the radiation type; b. Within each damage class, the relative proportions of simple and complex damage vary with radiation type, the latter being higher with high-LET radiations; c. Overall, for both low- and high-LET radiations, the ratios of the yields of base damage to SSBs are similar, being about 3.0 ± 0.2; d. Base damage contributes more to the complexity of both SSBs and DSBs, than additional SSB damage and this is true for both low- and high-LET radiations; and e. The average SSB/DSB ratio for low-LET radiations is about 18, which is about 5 times higher than that for high-LET radiations. The hypothesis that clustered DNA damage is more difficult for cells to repair has gained currency among radiobiologists. However, as yet, there is no direct in vivo experimental method to validate the dependence of kinetics of DNA repair on DNA damage complexity (both DSB and non-DSB types). The data on the detailed spectrum of DNA damage presented here, in particular the non-DSB type, provide a good basis for testing mechanistic models of DNA repair kinetics such as base excision repair.

摘要

本报告旨在展示通过计算机模拟产生的初始辐射诱导的细胞DNA损伤谱[特别关注非双链断裂(DSB)损伤]。本研究中模拟的辐射类型包括单能电子(100 eV - 1.5 keV)、超软X射线光子Ck、AlK和TiK,以及一些选定的离子,包括3.2 MeV/u质子;0.74和2.4 MeV/u氦离子;29 MeV/u氮离子和950 MeV/u铁离子。采用蒙特卡罗径迹结构方法,在模拟细胞条件下从单径迹作用模拟这些辐射类型诱导的损伤。模拟考虑了直接能量沉积事件的作用以及羟基自由基对包括水化水在内的几个螺旋圈的原子线性B - DNA片段的反应。我们的结果得出以下结论:a. 不同类型损伤[碱基损伤、简单和复杂单链断裂(SSB)以及DSB]的绝对水平因辐射类型而异;b. 在每个损伤类别中,简单损伤和复杂损伤的相对比例随辐射类型而变化,后者在高传能线密度辐射中更高;c. 总体而言,对于低传能线密度和高传能线密度辐射,碱基损伤与SSB产率的比值相似,约为3.0±0.2;d. 碱基损伤对SSB和DSB复杂性的贡献比额外的SSB损伤更大,低传能线密度和高传能线密度辐射均如此;e. 低传能线密度辐射的平均SSB/DSB比值约为18,约为高传能线密度辐射的5倍。聚集性DNA损伤对细胞来说更难修复这一假设在放射生物学家中已得到认可。然而,目前尚无直接的体内实验方法来验证DNA修复动力学对DNA损伤复杂性(DSB和非DSB类型)的依赖性。此处呈现的关于DNA损伤详细谱的数据,特别是非DSB类型的数据,为测试DNA修复动力学的机制模型(如碱基切除修复)提供了良好基础。

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