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波罗的海大西洋鳕鱼(Gadus morhua L.)鳃组织的转录组分析。

Transcriptome analysis of gill tissue of Atlantic cod Gadus morhua L. from the Baltic Sea.

作者信息

Małachowicz Magdalena, Kijewska Agnieszka, Wenne Roman

机构信息

Institute of Oceanology PAS, 81-712 Sopot, Poland.

Institute of Oceanology PAS, 81-712 Sopot, Poland.

出版信息

Mar Genomics. 2015 Oct;23:37-40. doi: 10.1016/j.margen.2015.04.005. Epub 2015 Apr 24.

DOI:10.1016/j.margen.2015.04.005
PMID:25913867
Abstract

The Atlantic cod (Gadus morhua L.) is one of the most ecologically and economically important marine fish species in the North Atlantic Ocean. Using Roche GS-FLX 454 pyrosequencing technique 962,516 reads, representing 379Mbp of the Baltic cod transcriptome, were obtained. Data was assembled into 14,029 contigs of which 100% displayed homology to the Atlantic cod transcriptome. Despite a high similarity between transcripts, evidence for significant differences between Baltic and Atlantic cod was found.

摘要

大西洋鳕鱼(Gadus morhua L.)是北大西洋生态和经济上最重要的海洋鱼类之一。利用罗氏GS-FLX 454焦磷酸测序技术,获得了962,516条读数,代表波罗的海鳕鱼转录组的379Mbp。数据被组装成14,029个重叠群,其中100%与大西洋鳕鱼转录组显示出同源性。尽管转录本之间相似度很高,但仍发现了波罗的海鳕鱼和大西洋鳕鱼之间存在显著差异的证据。

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