Gavrilov A A, Razin S V
Mol Biol (Mosk). 2015 Jan-Feb;49(1):26-45.
The eukaryotic cell nucleus is one of the most complex cell organelles. Despite the absence of membranes, the nuclear space is divided into numerous compartments where different processes in- volved in the genome activity take place. The most important nuclear compartments include nucleoli, nuclear speckles, PML bodies, Cajal bodies, histone locus bodies, Polycomb bodies, insulator bodies, transcription and replication factories. The structural basis for the nuclear compartmentalization is provided by genomic DNA that occupies most of the nuclear volume. Nuclear compartments, in turn, guide the chromosome folding by providing a platform for the spatial interaction of individual genomic loci. In this review, we discuss fundamental principles of higher order genome organization with a focus on chromosome territories and chromosome domains, as well as consider the structure and function of the key nuclear compartments. We show that the func- tional compartmentalization of the cell nucleus and genome spatial organization are tightly interconnected, and that this form of organization is highly dynamic and is based on stochastic processes.
真核细胞核是最复杂的细胞器之一。尽管没有膜结构,但核空间被划分为众多隔室,基因组活动涉及的不同过程在这些隔室中发生。最重要的核隔室包括核仁、核斑、早幼粒细胞白血病(PML)小体、卡哈尔体、组蛋白基因座体、多梳体、绝缘子体、转录工厂和复制工厂。占据大部分核体积的基因组DNA为核区室化提供了结构基础。反过来,核隔室通过为单个基因组位点的空间相互作用提供平台来指导染色体折叠。在这篇综述中,我们讨论高阶基因组组织的基本原理,重点关注染色体 territories 和染色体结构域,并考虑关键核隔室的结构和功能。我们表明,细胞核的功能区室化与基因组空间组织紧密相连,并且这种组织形式高度动态且基于随机过程。