a Agronomy and Soil Science Division , CSIR-CIMAP , Lucknow 226015 , India.
b Biotechnology Division , CSIR-CIMAP , Lucknow 226015 , India.
J Biomol Struct Dyn. 2016;34(1):152-62. doi: 10.1080/07391102.2015.1018841. Epub 2015 May 1.
We have investigated in vitro antifungal efficiency of nitrogen-doped carbon nanohorn (NCNH) against Rhizoctonia solani (R. solani) plant pathogenic fungi. NCNH with size of 50-60 nm and concentrations of 10, 50, 100, and 150 μg mL(-1) were used. The results showed that growth of fungi in the presence of NCNH was significantly (p > .05) inhibited at 150 μg mL(-1) (85.13 ± .97) after 72 h. The results were validated through computational approaches. Molecular docking analysis of NCNH with endochitinase protein of R. solani was performed to validate the potential of antifungal activity of NCNH. Docking results showed different conformations of interaction of NCNH with endochitinase enzyme. The conformation with least binding energy -13.54 kcal/mol was considered further. It is likely that NCNH interacts with the pathogens by mechanically wrapping, which may be one of the major toxicity actions of NCNH against R. solani. The analysis showed that NCNH might interwinds to endochitinase of R. solani leading to the deactivation of the enzyme. To best of our knowledge, this is the first report of antifungal efficacy of NCNH against R. solani and provides useful information about the application of NCNH in resisting crop disease.
我们研究了氮掺杂碳纳米角(NCNH)对植物病原菌立枯丝核菌(R. solani)的体外抗真菌效率。使用了尺寸为 50-60nm 且浓度分别为 10、50、100 和 150μg/mL 的 NCNH。结果表明,在 150μg/mL(85.13±0.97)浓度下,真菌在 NCNH 存在下的生长在 72 小时后受到显著抑制(p>.05)。通过计算方法验证了这些结果。对立枯丝核菌内切几丁质酶蛋白与 NCNH 的分子对接分析验证了 NCNH 抗真菌活性的潜力。对接结果显示了 NCNH 与内切几丁质酶之间不同的相互作用构象。进一步考虑了结合能最低的构象(-13.54kcal/mol)。NCNH 可能通过机械缠绕与病原体相互作用,这可能是 NCNH 对立枯丝核菌的主要毒性作用之一。分析表明,NCNH 可能缠绕到立枯丝核菌的内切几丁质酶上,导致酶失活。据我们所知,这是 NCNH 对立枯丝核菌抗真菌功效的首次报道,为 NCNH 在防治作物病害中的应用提供了有用信息。