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应用于DNA的毛细管电泳:确定并利用序列与结构推动生物分析(2009 - 2014年)

Capillary electrophoresis applied to DNA: determining and harnessing sequence and structure to advance bioanalyses (2009-2014).

作者信息

Durney Brandon C, Crihfield Cassandra L, Holland Lisa A

机构信息

C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, WV, 26506, USA.

出版信息

Anal Bioanal Chem. 2015 Sep;407(23):6923-38. doi: 10.1007/s00216-015-8703-5. Epub 2015 May 3.

DOI:10.1007/s00216-015-8703-5
PMID:25935677
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4551542/
Abstract

This review of capillary electrophoresis methods for DNA analyses covers critical advances from 2009 to 2014, referencing 184 citations. Separation mechanisms based on free-zone capillary electrophoresis, Ogston sieving, and reptation are described. Two prevalent gel matrices for gel-facilitated sieving, which are linear polyacrylamide and polydimethylacrylamide, are compared in terms of performance, cost, viscosity, and passivation of electroosmotic flow. The role of capillary electrophoresis in the discovery, design, and characterization of DNA aptamers for molecular recognition is discussed. Expanding and emerging techniques in the field are also highlighted.

摘要

本对用于DNA分析的毛细管电泳方法的综述涵盖了2009年至2014年的关键进展,参考文献184篇。描述了基于自由区毛细管电泳、奥格斯顿筛分和蠕动的分离机制。比较了用于凝胶辅助筛分的两种常见凝胶基质,即线性聚丙烯酰胺和聚二甲基丙烯酰胺,在性能、成本、粘度和电渗流钝化方面的情况。讨论了毛细管电泳在用于分子识别的DNA适体的发现、设计和表征中的作用。还强调了该领域不断扩展和新兴的技术。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/278f/4551542/cb7658ee4beb/216_2015_8703_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/278f/4551542/788775f9b712/216_2015_8703_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/278f/4551542/dc180b3f1212/216_2015_8703_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/278f/4551542/b13e958e33bf/216_2015_8703_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/278f/4551542/8ae1219e01f4/216_2015_8703_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/278f/4551542/f994f3dbc146/216_2015_8703_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/278f/4551542/cb7658ee4beb/216_2015_8703_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/278f/4551542/788775f9b712/216_2015_8703_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/278f/4551542/dc180b3f1212/216_2015_8703_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/278f/4551542/b13e958e33bf/216_2015_8703_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/278f/4551542/8ae1219e01f4/216_2015_8703_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/278f/4551542/f994f3dbc146/216_2015_8703_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/278f/4551542/cb7658ee4beb/216_2015_8703_Fig6_HTML.jpg

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2
Reversible phospholipid nanogels for deoxyribonucleic acid fragment size determinations up to 1500 base pairs and integrated sample stacking.用于脱氧核糖核酸片段大小测定的可逆性磷脂纳米凝胶,可达 1500 个碱基对,并集成了样品浓缩。
Anal Chim Acta. 2015 Jun 23;880:136-44. doi: 10.1016/j.aca.2015.03.009. Epub 2015 Mar 9.
3
Combining capillary electrophoresis and next-generation sequencing for aptamer selection.
基于毛细管筛分电泳评估小分子与 DNA 结合导致的结构变化。
Anal Sci. 2024 Apr;40(4):773-780. doi: 10.1007/s44211-024-00524-8. Epub 2024 Feb 28.
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Analysis of DNA Origami Nanostructures Using Capillary Electrophoresis.使用毛细管电泳分析 DNA 折纸纳米结构。
Anal Chem. 2023 Dec 26;95(51):18783-18792. doi: 10.1021/acs.analchem.3c03641. Epub 2023 Dec 13.
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Application of microfluidic chip electrophoresis for high-throughput nucleic acid fluorescence fragment analysis assays.微流控芯片电泳在高通量核酸荧光片段分析检测中的应用。
NAR Genom Bioinform. 2023 Jan 31;5(1):lqad011. doi: 10.1093/nargab/lqad011. eCollection 2023 Mar.
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