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哲水蚤谷胱甘肽S-转移酶(GST)基因多样性——细胞解毒的作用因素

Glutathione S-Transferase (GST) Gene Diversity in the Crustacean Calanus finmarchicus--Contributors to Cellular Detoxification.

作者信息

Roncalli Vittoria, Cieslak Matthew C, Passamaneck Yale, Christie Andrew E, Lenz Petra H

机构信息

Békésy Laboratory of Neurobiology, Pacific Biosciences Research Center, University of Hawaii at Manoa, Honolulu, Hawaii, United States of America.

Kewalo Marine Laboratory, Pacific Biosciences Research Center, University of Hawaii at Manoa, Honolulu, Hawaii, United States of America.

出版信息

PLoS One. 2015 May 6;10(5):e0123322. doi: 10.1371/journal.pone.0123322. eCollection 2015.

Abstract

Detoxification is a fundamental cellular stress defense mechanism, which allows an organism to survive or even thrive in the presence of environmental toxins and/or pollutants. The glutathione S-transferase (GST) superfamily is a set of enzymes involved in the detoxification process. This highly diverse protein superfamily is characterized by multiple gene duplications, with over 40 GST genes reported in some insects. However, less is known about the GST superfamily in marine organisms, including crustaceans. The availability of two de novo transcriptomes for the copepod, Calanus finmarchicus, provided an opportunity for an in depth study of the GST superfamily in a marine crustacean. The transcriptomes were searched for putative GST-encoding transcripts using known GST proteins from three arthropods as queries. The identified transcripts were then translated into proteins, analyzed for structural domains, and annotated using reciprocal BLAST analysis. Mining the two transcriptomes yielded a total of 41 predicted GST proteins belonging to the cytosolic, mitochondrial or microsomal classes. Phylogenetic analysis of the cytosolic GSTs validated their annotation into six different subclasses. The predicted proteins are likely to represent the products of distinct genes, suggesting that the diversity of GSTs in C. finmarchicus exceeds or rivals that described for insects. Analysis of relative gene expression in different developmental stages indicated low levels of GST expression in embryos, and relatively high expression in late copepodites and adult females for several cytosolic GSTs. A diverse diet and complex life history are factors that might be driving the multiplicity of GSTs in C. finmarchicus, as this copepod is commonly exposed to a variety of natural toxins. Hence, diversity in detoxification pathway proteins may well be key to their survival.

摘要

解毒是一种基本的细胞应激防御机制,它使生物体能够在环境毒素和/或污染物存在的情况下生存甚至茁壮成长。谷胱甘肽S-转移酶(GST)超家族是一组参与解毒过程的酶。这个高度多样化的蛋白质超家族的特点是有多个基因复制,在一些昆虫中报道了超过40个GST基因。然而,对于包括甲壳类动物在内的海洋生物中的GST超家族了解较少。哲水蚤(Calanus finmarchicus)的两个从头转录组的可得性为深入研究海洋甲壳类动物中的GST超家族提供了机会。使用来自三种节肢动物的已知GST蛋白作为查询序列,在转录组中搜索推定的GST编码转录本。然后将鉴定出的转录本翻译成蛋白质,分析其结构域,并使用双向BLAST分析进行注释。挖掘这两个转录组共产生了41种预测的GST蛋白,它们属于胞质、线粒体或微粒体类别。对胞质GSTs的系统发育分析验证了它们被注释为六个不同的亚类。预测的蛋白质可能代表不同基因的产物,这表明哲水蚤中GSTs的多样性超过或可与昆虫中描述的多样性相媲美。对不同发育阶段相对基因表达的分析表明,胚胎中GST表达水平较低,而几种胞质GSTs在后期桡足幼体和成年雌性中表达相对较高。多样化的饮食和复杂的生活史可能是推动哲水蚤中GSTs多样性的因素,因为这种桡足类动物通常会接触到各种天然毒素。因此,解毒途径蛋白的多样性很可能是它们生存的关键。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc55/4422733/2017e8addd29/pone.0123322.g001.jpg

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