Liu Yang, Wu Haoyang, Xie Qiang, Bu Wenjun
Institute of Entomology, College of Life Sciences, Nankai University, Tianjin, China.
PLoS One. 2015 May 8;10(5):e0125970. doi: 10.1371/journal.pone.0125970. eCollection 2015.
Erthesina fullo (Thunberg, 1783) is an economically important heteropteran species in China. Since only three nucleotide sequences of this species (COI, 16S rRNA, and 18S rRNA) appear in the GenBank database so far, no analysis of the molecular mechanisms underlying E. fullo's resistance to insecticide and environmental stress has been accomplished. We reported a de novo assembled and annotated transcriptome for adult E. fullo using the Illumina sequence system. A total of 53,359,458 clean reads of 4.8 billion nucleotides (nt) were assembled into 27,488 unigenes with an average length of 750 bp, of which 17,743 (64.55%) were annotated. In the present study, we identified 88 putative cytochrome P450 sequences and analyzed the evolution of cytochrome P450 superfamilies, genes of the CYP3 clan related to metabolizing xenobiotics and plant natural compounds, in E. fullo, increasing the candidate genes for the molecular mechanisms of insecticide resistance in P450. The sequenced transcriptome greatly expands the available genomic information and could allow a better understanding of the mechanisms of insecticide resistance at the systems biology level.
麻皮蝽(Erthesina fullo,(桑伯格,1783年))是中国一种具有重要经济意义的半翅目昆虫。由于到目前为止该物种在GenBank数据库中仅出现了三个核苷酸序列(COI、16S rRNA和18S rRNA),因此尚未完成对麻皮蝽抗杀虫剂和环境胁迫分子机制的分析。我们利用Illumina测序系统报道了麻皮蝽成虫的从头组装和注释转录组。总共53359458条干净 reads,共48亿个核苷酸(nt),被组装成27488个单基因,平均长度为750 bp,其中17743个(64.55%)得到注释。在本研究中,我们鉴定了88个假定的细胞色素P450序列,并分析了麻皮蝽中细胞色素P450超家族、与代谢外源化合物和植物天然化合物相关的CYP3家族基因的进化,增加了P450抗杀虫剂分子机制的候选基因。测序的转录组极大地扩展了可用的基因组信息,并有助于在系统生物学水平上更好地理解抗杀虫剂机制。