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外显子组测序对内分泌疾病的见解。

Insights from exome sequencing for endocrine disorders.

作者信息

de Bruin Christiaan, Dauber Andrew

机构信息

Cincinnati Children's Hospital Medical Center, Division of Endocrinology, 3333 Burnet Avenue, Cincinnati, OH 45229, USA.

出版信息

Nat Rev Endocrinol. 2015 Aug;11(8):455-64. doi: 10.1038/nrendo.2015.72. Epub 2015 May 12.

DOI:10.1038/nrendo.2015.72
PMID:25963271
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4806650/
Abstract

Whole-exome sequencing has emerged as a fast and effective tool for the elucidation of genetic defects underlying both rare and common human diseases. Increased availability and decreased costs of next-generation sequencing have enabled investigators to use this approach not only in individual patients with rare diseases, but also to screen large cohorts or populations for the genetic determinants of diseases. Within the field of endocrinology, exome sequencing has led to major advancements in our understanding of many disorders including adrenal disease, growth and puberty disorders and type 2 diabetes mellitus, as well as a multitude of rare genetic syndromes with prominent endocrine involvement. In this Review, we provide an overview of these new insights and discuss the role that exome sequencing is expected to have in endocrine research and future clinical practice.

摘要

全外显子组测序已成为一种快速有效的工具,用于阐明罕见和常见人类疾病背后的遗传缺陷。新一代测序技术的可用性提高和成本降低,使研究人员不仅能够在患有罕见疾病的个体患者中使用这种方法,还能够对大型队列或人群进行疾病遗传决定因素的筛查。在内分泌学领域,外显子组测序已使我们对许多疾病的理解取得了重大进展,包括肾上腺疾病、生长和青春期疾病以及2型糖尿病,以及许多有明显内分泌受累的罕见遗传综合征。在本综述中,我们概述了这些新见解,并讨论了外显子组测序在内分泌研究和未来临床实践中预期将发挥的作用。

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Insights from exome sequencing for endocrine disorders.外显子组测序对内分泌疾病的见解。
Nat Rev Endocrinol. 2015 Aug;11(8):455-64. doi: 10.1038/nrendo.2015.72. Epub 2015 May 12.
2
Next generation sequencing in endocrine practice.内分泌实践中的下一代测序
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Exome versus transcriptome sequencing in identifying coding region variants.外显子组测序与转录组测序在鉴定编码区变异中的比较。
Expert Rev Mol Diagn. 2012 Apr;12(3):241-51. doi: 10.1586/erm.12.10.
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Search for Novel Mutational Targets in Human Endocrine Diseases.寻找人类内分泌疾病中的新突变靶标。
Endocrinol Metab (Seoul). 2019 Mar;34(1):23-28. doi: 10.3803/EnM.2019.34.1.23.
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GENETICS IN ENDOCRINOLOGY: Genetic diagnosis of endocrine diseases by NGS: novel scenarios and unpredictable results and risks.内分泌遗传学:NGS 在内分泌疾病中的基因诊断:新的情况和不可预测的结果及风险。
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The genetics of neuropsychiatric diseases: looking in and beyond the exome.神经精神疾病的遗传学:外显子内与外的研究。
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Clin Chem Lab Med. 2011 Dec 23;50(7):1161-8. doi: 10.1515/cclm-2011-0841.

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Targeted massively parallel sequencing panel to diagnose genetic endocrine disorders in a tertiary hospital.在一家三甲医院中,使用靶向大规模平行测序panel 来诊断遗传性内分泌疾病。
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本文引用的文献

1
Reporting Incidental Findings in Clinical Whole Exome Sequencing: Incorporation of the 2013 ACMG Recommendations into Current Practices of Genetic Counseling.临床全外显子组测序中偶发发现的报告:将2013年美国医学遗传学与基因组学学会(ACMG)的建议纳入当前遗传咨询实践
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Exome sequencing for the diagnosis of 46,XY disorders of sex development.外显子组测序用于诊断46,XY性发育障碍
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9
Novel metrics to measure coverage in whole exome sequencing datasets reveal local and global non-uniformity.新型指标可用于测量全外显子组测序数据集的覆盖度,揭示局部和全局的非均匀性。
Sci Rep. 2017 Apr 13;7(1):885. doi: 10.1038/s41598-017-01005-x.
10
Time Course of Central Precocious Puberty Development Caused by an MKRN3 Gene Mutation: A Prismatic Case.MKRN3基因突变导致的中枢性性早熟发展的时间进程:一个典型病例
Horm Res Paediatr. 2016;86(2):126-130. doi: 10.1159/000447515. Epub 2016 Jul 16.
用于罕见孟德尔疾病基因鉴定的临床外显子组测序
JAMA. 2014 Nov 12;312(18):1880-7. doi: 10.1001/jama.2014.14604.
4
Molecular findings among patients referred for clinical whole-exome sequencing.接受临床全外显子组测序的患者的分子研究结果。
JAMA. 2014 Nov 12;312(18):1870-9. doi: 10.1001/jama.2014.14601.
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Defining the role of common variation in the genomic and biological architecture of adult human height.确定常见变异在成年人类身高的基因组和生物学结构中的作用。
Nat Genet. 2014 Nov;46(11):1173-86. doi: 10.1038/ng.3097. Epub 2014 Oct 5.
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A novel splice mutation in PLS3 causes X-linked early onset low-turnover osteoporosis.PLS3基因中的一种新型剪接突变导致X连锁早发性低转换型骨质疏松症。
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Exome sequencing reveals SYCE1 mutation associated with autosomal recessive primary ovarian insufficiency.外显子组测序揭示 SYCE1 突变与常染色体隐性原发性卵巢功能不全相关。
J Clin Endocrinol Metab. 2014 Oct;99(10):E2129-32. doi: 10.1210/jc.2014-1268. Epub 2014 Jul 25.
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A novel variant in CDKN1C is associated with intrauterine growth restriction, short stature, and early-adulthood-onset diabetes.细胞周期蛋白依赖性激酶抑制剂1C(CDKN1C)中的一种新型变体与宫内生长受限、身材矮小和成年早期发病的糖尿病有关。
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