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用于鉴定临床重要皮肤癣菌种类的布鲁克基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)系统的评估

Evaluation of the Bruker Matrix-Assisted Laser Desorption-Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) System for the Identification of Clinically Important Dermatophyte Species.

作者信息

Karabıçak Nilgün, Karatuna Onur, İlkit Macit, Akyar Işın

机构信息

National Mycology Reference Laboratory, Public Health Institute of Turkey, Sağlık Mah. Adnan Saygun Cad. No:55, Sıhhıye, 06100, Ankara, Turkey.

出版信息

Mycopathologia. 2015 Oct;180(3-4):165-71. doi: 10.1007/s11046-015-9898-x. Epub 2015 May 14.

Abstract

Dermatophytes can invade the stratum corneum of the skin and other keratinized tissues and are responsible for a broad diversity of diseases of skin, nails and hair. Although the standard identification of dermatophytoses depends on macroscopic and microscopic characterization of the colonies grown on special media, there are a number of limitations owing to intraspecies morphological variability, atypical morphology or interspecies morphological similarity which entails improvement in the identification methods. Matrix-assisted laser desorption-ionization time-of-flight mass spectrometry (MALDI-TOF MS) is a novel method which proved to be effective for rapid and reliable identification of dermatophytes grown in cultures when compared to conventional methods. We evaluated the performance of Bruker MALDI-TOF MS System (Bruker Daltonics, Germany) for identification of clinically relevant dermatophytes. In order to increase the identification capacity of the system, we created supplemental spectral database entries using ten reference dermatophyte strains (ten species in two genera). The utility of the generated database was then challenged using a total of 126 dermatophytes (115 clinical isolates and 11 additional reference strains). The results were evaluated by both manufacturer-recommended and lowered cutoff scores. MALDI-TOF MS provided correct identification in 122 (96.8 %) and 113 (89.7 %) of the isolates with the lowered scores and using the supplemented database, respectively, versus 65 (51.6 %) and 17 (13.5 %) correct identifications obtained by the unmodified database and recommended scores at the genus and species levels, respectively. Our results support the potential utility of MALDI-TOF MS as a routine tool for accurate and reliable identification of dermatophytes.

摘要

皮肤癣菌可侵入皮肤的角质层及其他角化组织,引发多种皮肤、指甲和毛发疾病。尽管皮肤癣菌病的标准鉴定依赖于在特殊培养基上生长的菌落的宏观和微观特征,但由于种内形态变异、非典型形态或种间形态相似性,存在一些局限性,这就需要改进鉴定方法。基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)是一种新方法,与传统方法相比,已证明其对培养的皮肤癣菌进行快速可靠鉴定有效。我们评估了布鲁克MALDI-TOF MS系统(德国布鲁克道尔顿公司)对临床相关皮肤癣菌的鉴定性能。为了提高该系统的鉴定能力,我们使用十种参考皮肤癣菌菌株(两个属的十个种)创建了补充光谱数据库条目。然后,使用总共126株皮肤癣菌(115株临床分离株和11株额外的参考菌株)对生成的数据库的实用性进行了检验。结果通过制造商推荐的截止分数和降低的截止分数进行评估。使用补充数据库且降低分数时,MALDI-TOF MS分别对122株(96.8%)和113株(89.7%)分离株进行了正确鉴定,而在属和种水平上,未修改的数据库和推荐分数分别得到65株(51.6%)和17株(13.5%)的正确鉴定。我们的结果支持MALDI-TOF MS作为准确可靠鉴定皮肤癣菌的常规工具的潜在实用性。

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