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利用基质辅助激光解析电离飞行时间质谱技术,通过直接将真菌细胞转移到研磨后的钢靶板上,快速鉴定皮肤癣菌。

Fast identification of dermatophytes by MALDI-TOF/MS using direct transfer of fungal cells on ground steel target plates.

机构信息

Dermatology Laboratory, Division of Laboratory Medicine, University Hospital of Geneva, Geneva, Switzerland.

Bacteriology Laboratory, Division of Laboratory Medicine, University Hospital of Geneva, Geneva, Switzerland.

出版信息

Mycoses. 2018 Sep;61(9):691-697. doi: 10.1111/myc.12793. Epub 2018 Jun 20.

Abstract

Dermatophytes cause human infections limited to keratinised tissues. We showed that the direct transfer method allows reliable identification of non-dermatophytes mould and yeast by MALDI-TOF/MS. We aimed at assessing whether the direct transfer method can be used for dermatophytes and whether an own mass spectra library would be superior to the Bruker library. We used the Bruker Biotyper to build a dermatophyte mass spectra library and assessed its performance by 1/testing a panel of mass spectrum produced with strains genotypically identified and, 2/comparing MALDI-TOF/MS identification to morphology-based methods. Identification of dermatophytes using the Bruker library is poor. Our library provided 97% concordance between ITS sequencing and MALDI-TOF/MS analysis with a panel of 1104 spectra corresponding to 276 strains. Direct transfer method using unpolished target plates allowed proper identification of 85% of dermatophytes clinical isolates most of which were common dermatophytes. A homemade dermatophyte MSP library is a prerequisite for accurate identification of species absent in the Bruker library but it also improves identification of species already listed in the database. The direct deposit method can be used to identify the most commonly found dermatophytes such as T. rubrum and T. interdigitale/mentagrophytes by MALDI-TOF/MS.

摘要

皮肤癣菌仅引起角蛋白组织的人类感染。我们表明,MALDI-TOF/MS 的直接转移方法可可靠地鉴定非皮肤癣菌霉菌和酵母。我们旨在评估直接转移方法是否可用于皮肤癣菌,以及自建的质量谱库是否优于 Bruker 库。我们使用 Bruker Biotyper 构建了皮肤癣菌质量谱库,并通过以下方式评估其性能:1/测试一组通过基因分型鉴定的菌株产生的质谱,2/将 MALDI-TOF/MS 鉴定与基于形态的方法进行比较。使用 Bruker 库鉴定皮肤癣菌的效果不佳。我们的库在 1104 个谱对应 276 株的面板上,与 ITS 测序和 MALDI-TOF/MS 分析之间具有 97%的一致性。使用未抛光靶板的直接转移方法可以正确识别 85%的皮肤癣菌临床分离株,其中大多数是常见的皮肤癣菌。自制的皮肤癣菌 MSP 库是准确鉴定 Bruker 库中未列出的物种的前提条件,但它也提高了对数据库中已列出的物种的鉴定能力。直接沉积法可通过 MALDI-TOF/MS 鉴定最常见的皮肤癣菌,如 T. rubrum 和 T. interdigitale/mentagrophytes。

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