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处于化学与生物学交叉点的系统视角。

The systems perspective at the crossroads between chemistry and biology.

作者信息

de la Escosura Andrés, Briones Carlos, Ruiz-Mirazo Kepa

机构信息

Department of Organic Chemistry, Universidad Autónoma de Madrid, Spain.

Department of Molecular Evolution, Centro de Astrobiología (CSIC-INTA, Associated to the NASA Astrobiology Institute), Spain.

出版信息

J Theor Biol. 2015 Sep 21;381:11-22. doi: 10.1016/j.jtbi.2015.04.036. Epub 2015 May 15.

Abstract

During the last century a number of authors pointed to the inherently systemic and dynamic nature of the living, yet their message was largely ignored by the mainstream of the scientific community. Tibor Ganti was one of those early pioneers, proposing a theoretical framework to understand the living principles in terms of chemical transformation cycles and their coupling. The turn of the century then brought with it a novel 'systems' paradigm, which shined light on all that previous work and carried many implications for the way we conceive of chemical and biological complexity today. In this article tribute is paid to some of those seminal contributions, highlighting the importance of adopting a systems view in present chemistry, particularly if plausible mechanisms of chemical evolution toward the first living entities want to be unraveled. We examine and put in perspective recent discoveries in the emerging subfield of 'prebiotic systems chemistry', reaching the conclusion that the functional coupling of protocellular subsystems (i.e., protometabolism, protogenome and membrane compartment) is the most challenging target to make qualitative advances in the problem of the origins of life. For the long-awaited goal of assembling an autonomous protocell from its most basic molecular building blocks, we further suggest that a systems integrative strategy should be considered from the earliest synthetic steps, already at the level of monomer precursors, opening the way to biogenesis.

摘要

在上个世纪,许多作者指出了生命内在的系统性和动态性,然而他们的观点在很大程度上被科学界主流所忽视。蒂博尔·甘蒂是那些早期的先驱者之一,他提出了一个理论框架,从化学转化循环及其耦合的角度来理解生命原理。世纪之交带来了一种全新的“系统”范式,它照亮了此前所有的工作,并对我们如今理解化学和生物复杂性的方式产生了诸多影响。在本文中,我们向其中一些具有开创性的贡献致敬,强调在当前化学中采用系统观点的重要性,特别是当我们想要揭示向首个生命实体化学进化的合理机制时。我们审视并展望了新兴的“前生物系统化学”子领域的最新发现,得出结论:原细胞子系统(即原代谢、原基因组和膜隔室)的功能耦合是在生命起源问题上取得质性进展最具挑战性的目标。对于从最基本的分子构建单元组装一个自主原细胞这一期待已久的目标,我们进一步建议,从最早的合成步骤,即在单体前体层面,就应考虑采用系统整合策略,为生物发生开辟道路。

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