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对NRC1(超敏反应相关细胞死亡所需的核苷酸结合结构域-1)的核苷酸结合结构域进行随机诱变,NRC1是一种下游信号转导核苷酸结合富含亮氨酸重复序列(NB-LRR)蛋白,结果在核苷酸结合口袋中鉴定出功能获得性突变。

Random mutagenesis of the nucleotide-binding domain of NRC1 (NB-LRR Required for Hypersensitive Response-Associated Cell Death-1), a downstream signalling nucleotide-binding, leucine-rich repeat (NB-LRR) protein, identifies gain-of-function mutations in the nucleotide-binding pocket.

作者信息

Sueldo Daniela J, Shimels Mahdere, Spiridon Laurentiu N, Caldararu Octav, Petrescu Andrei-Jose, Joosten Matthieu H A J, Tameling Wladimir I L

机构信息

Laboratory of Phytopathology, Wageningen University, Droevendaalsesteeg 1, 6708 PB, Wageningen, the Netherlands.

Department of Bioinformatics and Structural Biochemistry, Institute of Biochemistry of the Romanian Academy, Splaiul Independentei 296, 060036, Bucharest, Romania.

出版信息

New Phytol. 2015 Oct;208(1):210-23. doi: 10.1111/nph.13459. Epub 2015 May 26.

Abstract

Plant nucleotide-binding, leucine-rich repeat (NB-LRR) proteins confer immunity to pathogens possessing the corresponding avirulence proteins. Activation of NB-LRR proteins is often associated with induction of the hypersensitive response (HR), a form of programmed cell death. NRC1 (NB-LRR Required for HR-Associated Cell Death-1) is a tomato (Solanum lycopersicum) NB-LRR protein that participates in the signalling cascade leading to resistance to the pathogens Cladosporium fulvum and Verticillium dahliae. To identify mutations in NRC1 that cause increased signalling activity, we generated a random library of NRC1 variants mutated in their nucleotide-binding domain and screened them for the ability to induce an elicitor-independent HR in Nicotiana tabacum. Screening of 1920 clones retrieved 11 gain-of-function mutants, with 10 of them caused by a single amino acid substitution. All substitutions are located in or very close to highly conserved motifs within the nucleotide-binding domain, suggesting modulation of the signalling activity of NRC1. Three-dimensional modelling of the nucleotide-binding domain of NRC1 revealed that the targeted residues are centred around the bound nucleotide. Our mutational approach has generated a wide set of novel gain-of-function mutations in NRC1 and provides insight into how the activity of this NB-LRR is regulated.

摘要

植物核苷酸结合富含亮氨酸重复序列(NB-LRR)蛋白赋予植物对具有相应无毒蛋白的病原体的免疫力。NB-LRR蛋白的激活通常与过敏反应(HR)的诱导相关,过敏反应是一种程序性细胞死亡形式。NRC1(HR相关细胞死亡所需的NB-LRR-1)是一种番茄(Solanum lycopersicum)NB-LRR蛋白,参与导致对病原体番茄叶霉病菌(Cladosporium fulvum)和大丽轮枝菌(Verticillium dahliae)产生抗性的信号级联反应。为了鉴定导致信号活性增加的NRC1突变,我们构建了一个在其核苷酸结合结构域发生突变的NRC1变体随机文库,并筛选它们在烟草中诱导不依赖激发子的HR的能力。对1920个克隆的筛选获得了11个功能获得型突变体,其中10个是由单个氨基酸取代引起的。所有取代都位于核苷酸结合结构域内高度保守的基序中或非常接近这些基序,这表明NRC1的信号活性受到了调节。NRC1核苷酸结合结构域的三维建模显示,靶向残基集中在结合的核苷酸周围。我们的突变方法在NRC1中产生了大量新的功能获得型突变,并深入了解了这种NB-LRR的活性是如何被调节的。

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