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来自麦角菌的“孤独蛋白”的三维结构为含罗斯曼折叠的赖氨酸脱羧酶样蛋白的磷酸核糖水解酶功能提供了见解。

The three-dimensional structure of "Lonely Guy" from Claviceps purpurea provides insights into the phosphoribohydrolase function of Rossmann fold-containing lysine decarboxylase-like proteins.

作者信息

Dzurová Lenka, Forneris Federico, Savino Simone, Galuszka Petr, Vrabka Josef, Frébort Ivo

机构信息

Centre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University, Olomouc, 783 71, Czech Republic.

The Armenise-Harvard Laboratory of Structural Biology, Department of Biology and Biotechnology, University of Pavia, Pavia, 27100, Italy.

出版信息

Proteins. 2015 Aug;83(8):1539-46. doi: 10.1002/prot.24835. Epub 2015 Jul 1.

Abstract

The recently discovered cytokinin (CK)-specific phosphoribohydrolase "Lonely Guy" (LOG) is a key enzyme of CK biosynthesis, converting inactive CK nucleotides into biologically active free bases. We have determined the crystal structures of LOG from Claviceps purpurea (cpLOG) and its complex with the enzymatic product phosphoribose. The structures reveal a dimeric arrangement of Rossmann folds, with the ligands bound to large pockets at the interface between cpLOG monomers. Structural comparisons highlight the homology of cpLOG to putative lysine decarboxylases. Extended sequence analysis enabled identification of a distinguishing LOG sequence signature. Taken together, our data suggest phosphoribohydrolase activity for several proteins of unknown function.

摘要

最近发现的细胞分裂素(CK)特异性磷酸核糖水解酶“孤独家伙”(LOG)是CK生物合成的关键酶,可将无活性的CK核苷酸转化为具有生物活性的游离碱。我们已经确定了来自麦角菌(cpLOG)的LOG晶体结构及其与酶促产物磷酸核糖的复合物结构。这些结构揭示了Rossmann折叠的二聚体排列,配体结合在cpLOG单体之间界面处的大口袋中。结构比较突出了cpLOG与假定的赖氨酸脱羧酶的同源性。扩展序列分析能够鉴定出一个独特的LOG序列特征。综合来看,我们的数据表明几种功能未知的蛋白质具有磷酸核糖水解酶活性。

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