Suppr超能文献

嗜热古菌 REY15A 的孤独古菌(LOG)同源物 SiRe_0427 是一种新型磷核糖水解酶。

The Lonely Guy (LOG) Homologue SiRe_0427 from the Thermophilic Archaeon REY15A Is a Phosphoribohydrolase Representing a Novel Group.

机构信息

State Key Laboratory of Microbial Technology, Microbial Technology Institute, Shandong University, Qingdao, People's Republic of China.

State Key Laboratory of Microbial Technology, Microbial Technology Institute, Shandong University, Qingdao, People's Republic of China

出版信息

Appl Environ Microbiol. 2019 Oct 1;85(20). doi: 10.1128/AEM.01739-19. Print 2019 Oct 15.

Abstract

Lonely Guy (LOG) proteins are important enzymes in cellular organisms, which catalyze the final step in the production of biologically active cytokinins via dephosphoribosylation. LOG proteins are vital enzymes in plants for the activation of cytokinin precursors, which is crucial for plant growth and development. In fungi and bacteria, LOGs are implicated in pathogenic or nonpathogenic interactions with their plant hosts. However, LOGs have also been identified in the human pathogen , and the accumulation of cytokinin-degraded products, aldehydes, within bacterial cells is lethal to the bacterium in the presence of nitric oxide, suggesting diverse roles of LOGs in various species. In this study, we conducted biochemical and genetic analysis of a LOG homologue, SiRe_0427, from the hyperthermophilic archaeon REY15A. The protein possessed the LOG motif GGGxGTxxE and exhibited phosphoribohydrolase activity on adenosine-5-monophosphate (AMP), similar to LOGs from eukaryotes and bacteria. Alanine mutants at either catalytic residues or substrate binding sites lost their activity, resembling other known LOGs. SiRe_0427 is probably a homotetramer, as revealed by size exclusion chromatography and chemical cross-linking. We found that the gene encoding SiRe_0427 could be knocked out; however, the Δ strain exhibited no apparent difference in growth compared to the wild type, nor did it show any difference in sensitivity to UV irradiation under our laboratory growth conditions. Overall, these findings indicate that archaeal LOG homologue is active as a phosphoribohydrolase. Lonely Guy (LOG) is an essential enzyme for the final biosynthesis of cytokinins, which regulate almost every aspect of growth and development in plants. LOG protein was originally discovered 12 years ago in a strain of with a distinct floral phenotype of a single stamen. Recently, the presence of LOG homologues has been reported in , an obligate human pathogen. To date, active LOG proteins have been reported in plants, pathogenic and nonpathogenic fungi, and bacteria, but there have been no experimental reports of LOG protein from archaea. In the current work, we report the identification of a LOG homologue active on AMP from REY15A, a thermophilic archaeon. The protein likely forms a tetramer in solution and represents a novel evolutionary lineage. The results presented here expand our knowledge regarding proteins with phosphoribohydrolase activities and open an avenue for studying signal transduction networks of archaea and potential applications of LOG enzymes in agriculture and industry.

摘要

Lonely Guy (LOG) 蛋白是细胞生物中的重要酶,通过去磷酸核糖基化催化生物活性细胞分裂素的最后一步合成。LOG 蛋白是植物中细胞分裂素前体激活的关键酶,对植物的生长和发育至关重要。在真菌和细菌中,LOG 参与与植物宿主的致病性或非致病性相互作用。然而,LOG 也已在人类病原体 中被鉴定出来,并且在存在一氧化氮的情况下,细胞分裂素降解产物醛在细菌细胞内的积累对细菌是致命的,这表明 LOG 在各种物种中具有不同的作用。在这项研究中,我们对来自嗜热古菌 REY15A 的 LOG 同源物 SiRe_0427 进行了生化和遗传分析。该蛋白具有 LOG 基序 GGGxGTxxE,并表现出对腺嘌呤-5-单磷酸 (AMP) 的磷酸核糖基水解酶活性,类似于真核生物和细菌中的 LOG。催化残基或底物结合位点的丙氨酸突变体失去其活性,类似于其他已知的 LOG。SiRe_0427 可能是同源四聚体,如通过大小排阻层析和化学交联所揭示的。我们发现可以敲除编码 SiRe_0427 的基因;然而,与野生型相比,Δ 菌株的生长没有明显差异,并且在我们的实验室生长条件下,对紫外线照射的敏感性也没有差异。总体而言,这些发现表明古菌 LOG 同源物作为磷酸核糖基水解酶是活跃的。Lonely Guy (LOG) 是细胞分裂素最终生物合成所必需的酶,细胞分裂素调节植物生长和发育的几乎各个方面。12 年前,LOG 蛋白最初在一株具有独特的单雄蕊花朵表型的 菌株中被发现。最近,LOG 同源物的存在已在 中被报道,这是一种必需的人类病原体。迄今为止,已在植物、致病性和非致病性真菌以及细菌中报道了具有活性的 LOG 蛋白,但尚未有关于古菌 LOG 蛋白的实验报道。在目前的工作中,我们报道了从嗜热古菌 REY15A 中鉴定出一种对 AMP 具有活性的 LOG 同源物。该蛋白在溶液中可能形成四聚体,代表了一个新的进化谱系。这里呈现的结果扩展了我们对具有磷酸核糖基水解酶活性的蛋白质的认识,并为研究古菌的信号转导网络以及 LOG 酶在农业和工业中的潜在应用开辟了途径。

相似文献

8
Functional Insights Into Protein Acetylation in the Hyperthermophilic Archaeon .在嗜热古菌中蛋白质乙酰化的功能见解。
Mol Cell Proteomics. 2019 Aug;18(8):1572-1587. doi: 10.1074/mcp.RA119.001312. Epub 2019 Jun 9.

引用本文的文献

9
Cytokinin Sensing in Bacteria.细菌中细胞分裂素的感应
Biomolecules. 2020 Jan 25;10(2):186. doi: 10.3390/biom10020186.

本文引用的文献

2
A census-based estimate of Earth's bacterial and archaeal diversity.基于人口普查的地球细菌和古菌多样性估计。
PLoS Biol. 2019 Feb 4;17(2):e3000106. doi: 10.1371/journal.pbio.3000106. eCollection 2019 Feb.

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验