Panicker Indu S, Browning Glenn F, Markham Philip F
Asia-Pacific Centre for Animal Health, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Melbourne, Victoria, Australia.
PLoS One. 2015 May 26;10(5):e0127911. doi: 10.1371/journal.pone.0127911. eCollection 2015.
While the genomes of many Mycoplasma species have been sequenced, there are no collated data on translational start codon usage, and the effects of alternate start codons on gene expression have not been studied. Analysis of the annotated genomes found that ATG was the most prevalent translational start codon among Mycoplasma spp. However in Mycoplasma gallisepticum a GTG start codon is commonly used in the vlhA multigene family, which encodes a highly abundant, phase variable lipoprotein adhesin. Therefore, the effect of this alternate start codon on expression of a reporter PhoA lipoprotein was examined in M. gallisepticum. Mutation of the start codon from ATG to GTG resulted in a 2.5 fold reduction in the level of transcription of the phoA reporter, but the level of PhoA activity in the transformants containing phoA with a GTG start codon was only 63% of that of the transformants with a phoA with an ATG start codon, suggesting that GTG was a more efficient translational initiation codon. The effect of swapping the translational start codon in phoA reporter gene expression was less in M. gallisepticum than has been seen previously in Escherichia coli or Bacillus subtilis, suggesting the process of translational initiation in mycoplasmas may have some significant differences from those used in other bacteria. This is the first study of translational start codon usage in mycoplasmas and the impact of the use of an alternate start codon on expression in these bacteria.
虽然许多支原体物种的基因组已被测序,但关于翻译起始密码子使用情况尚无整理好的数据,并且尚未研究替代起始密码子对基因表达的影响。对已注释基因组的分析发现,ATG是支原体属中最普遍的翻译起始密码子。然而,在鸡毒支原体中,GTG起始密码子常用于vlhA多基因家族,该家族编码一种高度丰富的、相位可变的脂蛋白黏附素。因此,在鸡毒支原体中研究了这种替代起始密码子对报告基因PhoA脂蛋白表达的影响。起始密码子从ATG突变为GTG导致phoA报告基因转录水平降低2.5倍,但含有GTG起始密码子的phoA转化体中PhoA活性水平仅为含有ATG起始密码子的phoA转化体的63%,这表明GTG是更有效的翻译起始密码子。在鸡毒支原体中,phoA报告基因表达中翻译起始密码子互换的影响比之前在大肠杆菌或枯草芽孢杆菌中观察到的要小,这表明支原体中的翻译起始过程可能与其他细菌有一些显著差异。这是关于支原体中翻译起始密码子使用情况以及使用替代起始密码子对这些细菌中表达的影响的首次研究。