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端粒DNA通过发夹环之间形成鸟嘌呤四联体而二聚化。

Telomeric DNA dimerizes by formation of guanine tetrads between hairpin loops.

作者信息

Sundquist W I, Klug A

机构信息

Medical Research Council Laboratory of Molecular Biology, Cambridge, UK.

出版信息

Nature. 1989 Dec 14;342(6251):825-9. doi: 10.1038/342825a0.

DOI:10.1038/342825a0
PMID:2601741
Abstract

The telomeric ends of eukaryotic chromosomes are composed of simple repeating sequences in which one DNA strand contains short tracts of guanine residues alternating with short tracts of A/T-rich sequences. The guanine-rich strand is always oriented in a 5'-3' direction towards the end of the chromosome and is extended to produce a 3' overhang of about two repeating units in species where the telomeric terminus is known. This overhang has been implicated in the formation of several unusual intra-and intermolecular DNA structures, although none of these structures has been characterized fully. We now report that oligonucleotides encoding Tetrahymena telomeres dimerize to form stable complexes in solution. This salt-dependent dimerization is mediated entirely by the 3'-terminal telomeric overhang (TT-GGGGTTGGGG) and produces complexes in which the N7 position of every guanine in the overhangs is chemically inaccessible. We therefore propose that telomeric DNA dimerizes by hydrogen bonding between two intramolecular hairpin loops, to form antiparallel quadruplexes containing cyclic guanine base tetrads. These novel hairpin dimers may be important in telomere association and recombination and could also provide a general mechanism for pairing two double helices in other recombinational processes.

摘要

真核生物染色体的端粒末端由简单的重复序列组成,其中一条DNA链包含鸟嘌呤残基的短片段与富含A/T的短片段交替排列。富含鸟嘌呤的链总是以5'-3'方向朝向染色体末端,并延伸产生一个3'端突出端,在已知端粒末端的物种中,该突出端约为两个重复单元。尽管这些结构均未得到充分表征,但该突出端与几种异常的分子内和分子间DNA结构的形成有关。我们现在报告,编码四膜虫端粒的寡核苷酸在溶液中会二聚化形成稳定的复合物。这种依赖于盐的二聚化完全由3'末端的端粒突出端(TT-GGGGTTGGGG)介导,并产生复合物,其中突出端中每个鸟嘌呤的N7位置在化学上是不可接近的。因此,我们提出端粒DNA通过两个分子内发夹环之间的氢键二聚化,形成含有环状鸟嘌呤碱基四联体的反平行四链体。这些新型发夹二聚体可能在端粒缔合和重组中起重要作用,并且还可能为在其他重组过程中配对两个双螺旋提供一种通用机制。

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Telomeric DNA dimerizes by formation of guanine tetrads between hairpin loops.端粒DNA通过发夹环之间形成鸟嘌呤四联体而二聚化。
Nature. 1989 Dec 14;342(6251):825-9. doi: 10.1038/342825a0.
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Stability and structure of telomeric DNA sequences forming quadruplexes containing four G-tetrads with different topological arrangements.端粒DNA序列的稳定性和结构,这些序列形成包含四个具有不同拓扑排列的G-四联体的四重结构。
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A double chain reversal loop and two diagonal loops define the architecture of a unimolecular DNA quadruplex containing a pair of stacked G(syn)-G(syn)-G(anti)-G(anti) tetrads flanked by a G-(T-T) Triad and a T-T-T triple.一个双链反向环和两个对角环定义了一个单分子DNA四链体的结构,该四链体包含一对堆叠的G(顺式)-G(顺式)-G(反式)-G(反式)四分体,两侧分别是一个G-(T-T)三联体和一个T-T-T三联体。
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Characterization of parallel and antiparallel G-tetraplex structures by vibrational spectroscopy.通过振动光谱对平行和反平行G-四链体结构进行表征。
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Interactions of TRF2 with model telomeric ends.TRF2与模型端粒末端的相互作用。
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