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多歧苏铁中的SNARE分子:膜融合机制的独特与保守特征

SNARE Molecules in Marchantia polymorpha: Unique and Conserved Features of the Membrane Fusion Machinery.

作者信息

Kanazawa Takehiko, Era Atsuko, Minamino Naoki, Shikano Yu, Fujimoto Masaru, Uemura Tomohiro, Nishihama Ryuichi, Yamato Katsuyuki T, Ishizaki Kimitsune, Nishiyama Tomoaki, Kohchi Takayuki, Nakano Akihiko, Ueda Takashi

机构信息

Department of Biological Sciences, Graduate School of Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033 Japan.

Department of Biological Sciences, Graduate School of Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033 Japan Department of Cell Genetics, National Institute of Genetics, Mishima, Shizuoka, 411-8540 Japan.

出版信息

Plant Cell Physiol. 2016 Feb;57(2):307-24. doi: 10.1093/pcp/pcv076. Epub 2015 May 27.

Abstract

The membrane trafficking pathway has been diversified in a specific way for each eukaryotic lineage, probably to fulfill specific functions in the organisms. In green plants, comparative genomics has supported the possibility that terrestrialization and/or multicellularization could be associated with the elaboration and diversification of membrane trafficking pathways, which have been accomplished by an expansion of the numbers of genes required for machinery components of membrane trafficking, including soluble N-ethylmaleimide-sensitive factor attachment protein receptor (SNARE) proteins. However, information regarding membrane trafficking pathways in basal land plant lineages remains limited. In the present study, we conducted extensive analyses of SNARE molecules, which mediate membrane fusion between target membranes and transport vesicles or donor organelles, in the liverwort, Marchantia polymorpha. The M. polymorpha genome contained at least 34 genes for 36 SNARE proteins, comprising fundamental sets of SNARE proteins that are shared among land plant lineages with low degrees of redundancy. We examined the subcellular distribution of a major portion of these SNARE proteins by expressing Citrine-tagged SNARE proteins in M. polymorpha, and the results showed that some of the SNARE proteins were targeted to different compartments from their orthologous products in Arabidopsis thaliana. For example, MpSYP12B was localized to the surface of the oil body, which is a unique organelle in liverworts. Furthermore, we identified three VAMP72 members with distinctive structural characteristics, whose N-terminal extensions contain consensus sequences for N-myristoylation. These results suggest that M. polymorpha has acquired unique membrane trafficking pathways associated with newly acquired machinery components during evolution.

摘要

膜运输途径在每个真核生物谱系中都以特定方式多样化,这可能是为了在生物体中履行特定功能。在绿色植物中,比较基因组学支持了陆地化和/或多细胞化可能与膜运输途径的细化和多样化相关的可能性,这是通过膜运输机制成分所需基因数量的增加来实现的,这些成分包括可溶性N - 乙基马来酰亚胺敏感因子附着蛋白受体(SNARE)蛋白。然而,关于基部陆地植物谱系中膜运输途径的信息仍然有限。在本研究中,我们对介导靶膜与运输囊泡或供体细胞器之间膜融合的SNARE分子进行了广泛分析,研究对象是地钱多歧藓(Marchantia polymorpha)。多歧藓基因组包含至少34个基因,用于编码36种SNARE蛋白,这些蛋白构成了陆地植物谱系中共享的基本SNARE蛋白集,冗余度较低。我们通过在多歧藓中表达带有柠檬黄标签的SNARE蛋白,研究了这些SNARE蛋白中大部分的亚细胞分布,结果表明,一些SNARE蛋白的定位与其在拟南芥中的直系同源产物不同。例如,MpSYP12B定位于油体表面,油体是地钱中的一种独特细胞器。此外,我们鉴定出三个具有独特结构特征的VAMP72成员,其N端延伸包含N - 肉豆蔻酰化的共有序列。这些结果表明,多歧藓在进化过程中获得了与新获得的机制成分相关的独特膜运输途径。

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