Centro de Investigaciones Biológicas (CSIC), Ramiro de Maeztu 9, 28040 Madrid, Spain.
Institute for Research in Biomedicine (IRB-Barcelona), Baldiri Reixac 10-12, 08028 Barcelona, Spain.
Microbiol Spectr. 2015 Feb;3(1):PLAS-0035-2014. doi: 10.1128/microbiolspec.PLAS-0035-2014.
Plasmids are DNA entities that undergo controlled replication independent of the chromosomal DNA, a crucial step that guarantees the prevalence of the plasmid in its host. DNA replication has to cope with the incapacity of the DNA polymerases to start de novo DNA synthesis, and different replication mechanisms offer diverse solutions to this problem. Rolling-circle replication (RCR) is a mechanism adopted by certain plasmids, among other genetic elements, that represents one of the simplest initiation strategies, that is, the nicking by a replication initiator protein on one parental strand to generate the primer for leading-strand initiation and a single priming site for lagging-strand synthesis. All RCR plasmid genomes consist of a number of basic elements: leading strand initiation and control, lagging strand origin, phenotypic determinants, and mobilization, generally in that order of frequency. RCR has been mainly characterized in Gram-positive bacterial plasmids, although it has also been described in Gram-negative bacterial or archaeal plasmids. Here we aim to provide an overview of the RCR plasmids' lifestyle, with emphasis on their characteristic traits, promiscuity, stability, utility as vectors, etc. While RCR is one of the best-characterized plasmid replication mechanisms, there are still many questions left unanswered, which will be pointed out along the way in this review.
质粒是一种能够独立于染色体 DNA 进行受控复制的 DNA 实体,这是保证质粒在宿主中普遍存在的关键步骤。DNA 复制必须应对 DNA 聚合酶无法从头开始合成 DNA 的能力,不同的复制机制为这个问题提供了不同的解决方案。滚环复制(RCR)是某些质粒和其他遗传元件采用的一种机制,它代表了最简单的起始策略之一,即复制起始蛋白在一条亲代链上的切口,以生成引发链起始的引物和一个用于滞后链合成的单一引物位点。所有 RCR 质粒基因组都由多个基本元件组成:先导链起始和控制、滞后链原点、表型决定因素和移动性,通常按出现频率排列。RCR 主要在革兰氏阳性菌质粒中得到了表征,尽管也在革兰氏阴性菌或古菌质粒中有所描述。在这里,我们旨在概述 RCR 质粒的生活方式,重点介绍其特征、混杂性、稳定性、作为载体的用途等。虽然 RCR 是最具特征的质粒复制机制之一,但仍有许多问题尚未得到解答,本文将在讨论过程中指出这些问题。