Sáez Julián Esteban, Gómez Andrea Verónica, Barrios Álvaro Patricio, Parada Guillermo Eduardo, Galdames Leopoldo, González Marcela, Andrés María Estela
Department of Cellular and Molecular Biology, Faculty of Biological Sciences, Pontificia Universidad Católica de Chile, Santiago, Chile.
PLoS One. 2015 Jun 25;10(6):e0131760. doi: 10.1371/journal.pone.0131760. eCollection 2015.
CoREST (CoREST1, rcor1) transcriptional corepressor together with the histone demethylase LSD1 (KDM1A) and the histone deacetylases HDAC1/2 form LSD1-CoREST-HDAC (LCH) transcriptional complexes to regulate gene expression. CoREST1 belong to a family that also comprises CoREST2 (rcor2) and CoREST3 (rcor3). CoREST1 represses the expression of neuronal genes during neuronal differentiation. However, the role of paralogs CoREST2 and CoREST3 in this process is just starting to emerge. Here, we report the expression of all CoRESTs and partners LSD1 and HDAC1/2 in two models of neuronal differentiation: Nerve-Growth-Factor (NGF)-induced neuronal phenotype of PC12 cells, and in vitro maturation of embryonic rat cortical neurons. In both models, a concomitant and gradual decrease of LSD1, HDAC1, HDAC2, CoREST1, and CoREST2, but not CoREST3 was observed. As required by the study, full-length rat rcor1 gene was identified using in silico analysis of available rat genome. The work was also complemented by the analysis of rat RNA-seq databases. The analysis showed that all CoRESTs, including the identified four splicing variants of rat CoREST3, display a wide expression in adult tissues. Moreover, the analysis of RNA-seq databases showed that CoREST2 displays a higher expression than CoREST1 and CoREST3 in the mature brain. Immunofluorescent assays and immunoblots of adult rat brain showed that all CoRESTs are present in both glia and neurons. Regarding functional partnership, CoREST2 and CoREST3 interact with all LSD1 splicing variants. In conclusion, neuronal differentiation is accompanied by decreased expression of all core components of LCH complexes, but not CoREST3. The combination of the differential transcriptional repressor capacity of LCH complexes and variable protein levels of its different components should result in a finely tuned gene expression during neuronal differentiation and in the adult brain.
共抑制因子CoREST(CoREST1,rcor1)与组蛋白去甲基化酶LSD1(KDM1A)以及组蛋白脱乙酰酶HDAC1/2共同形成LSD1-CoREST-HDAC(LCH)转录复合物来调控基因表达。CoREST1属于一个还包括CoREST2(rcor2)和CoREST3(rcor3)的家族。CoREST1在神经元分化过程中抑制神经元基因的表达。然而,旁系同源物CoREST2和CoREST3在此过程中的作用才刚刚开始显现。在此,我们报告了所有CoREST及其伙伴LSD1和HDAC1/2在两种神经元分化模型中的表达情况:神经生长因子(NGF)诱导PC12细胞的神经元表型,以及胚胎大鼠皮质神经元的体外成熟。在这两种模型中,均观察到LSD1、HDAC1、HDAC2、CoREST1和CoREST2同时且逐渐减少,但CoREST3未减少。根据研究需要,通过对现有大鼠基因组进行计算机分析鉴定出全长大鼠rcor1基因。该研究还通过对大鼠RNA测序数据库的分析得到补充。分析表明,所有CoREST,包括鉴定出的大鼠CoREST3的四种剪接变体,在成年组织中广泛表达。此外,对RNA测序数据库的分析表明,CoREST2在成熟大脑中的表达高于CoREST1和CoREST3。成年大鼠脑的免疫荧光测定和免疫印迹显示,所有CoREST在神经胶质细胞和神经元中均有表达。关于功能伙伴关系,CoREST2和CoREST3与所有LSD1剪接变体相互作用。总之,神经元分化伴随着LCH复合物所有核心成分的表达降低,但CoREST3除外。LCH复合物不同的转录抑制能力及其不同成分的可变蛋白水平相结合,应会在神经元分化过程中和成年大脑中导致基因表达的精细调控。