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用稳健拟合算法绘制早期胚胎心脏的传导速度

Mapping conduction velocity of early embryonic hearts with a robust fitting algorithm.

作者信息

Gu Shi, Wang Yves T, Ma Pei, Werdich Andreas A, Rollins Andrew M, Jenkins Michael W

机构信息

Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA.

Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA ; Department of Pediatrics, Case Western Reserve University, Cleveland, OH, 44016, USA.

出版信息

Biomed Opt Express. 2015 May 18;6(6):2138-57. doi: 10.1364/BOE.6.002138. eCollection 2015 Jun 1.

Abstract

Cardiac conduction maturation is an important and integral component of heart development. Optical mapping with voltage-sensitive dyes allows sensitive measurements of electrophysiological signals over the entire heart. However, accurate measurements of conduction velocity during early cardiac development is typically hindered by low signal-to-noise ratio (SNR) measurements of action potentials. Here, we present a novel image processing approach based on least squares optimizations, which enables high-resolution, low-noise conduction velocity mapping of smaller tubular hearts. First, the action potential trace measured at each pixel is fit to a curve consisting of two cumulative normal distribution functions. Then, the activation time at each pixel is determined based on the fit, and the spatial gradient of activation time is determined with a two-dimensional (2D) linear fit over a square-shaped window. The size of the window is adaptively enlarged until the gradients can be determined within a preset precision. Finally, the conduction velocity is calculated based on the activation time gradient, and further corrected for three-dimensional (3D) geometry that can be obtained by optical coherence tomography (OCT). We validated the approach using published activation potential traces based on computer simulations. We further validated the method by adding artificially generated noise to the signal to simulate various SNR conditions using a curved simulated image (digital phantom) that resembles a tubular heart. This method proved to be robust, even at very low SNR conditions (SNR = 2-5). We also established an empirical equation to estimate the maximum conduction velocity that can be accurately measured under different conditions (e.g. sampling rate, SNR, and pixel size). Finally, we demonstrated high-resolution conduction velocity maps of the quail embryonic heart at a looping stage of development.

摘要

心脏传导成熟是心脏发育的一个重要且不可或缺的组成部分。利用电压敏感染料进行光学映射能够对整个心脏的电生理信号进行灵敏测量。然而,在心脏发育早期,动作电位的低信噪比(SNR)测量通常会阻碍传导速度的准确测量。在此,我们提出一种基于最小二乘法优化的新型图像处理方法,该方法能够对较小的管状心脏进行高分辨率、低噪声的传导速度映射。首先,将在每个像素处测量的动作电位轨迹拟合到由两个累积正态分布函数组成的曲线上。然后,根据拟合结果确定每个像素处的激活时间,并通过在方形窗口上进行二维(2D)线性拟合来确定激活时间的空间梯度。窗口大小会自适应扩大,直到能够在预设精度内确定梯度。最后,根据激活时间梯度计算传导速度,并进一步针对可通过光学相干断层扫描(OCT)获得的三维(3D)几何结构进行校正。我们使用基于计算机模拟的已发表激活电位轨迹验证了该方法。我们还通过向信号中添加人工生成的噪声来模拟各种信噪比条件,使用类似于管状心脏的弯曲模拟图像(数字模型)进一步验证了该方法。即使在非常低的信噪比条件下(SNR = 2 - 5),该方法也被证明是稳健的。我们还建立了一个经验方程,以估计在不同条件下(例如采样率、SNR和像素大小)能够准确测量的最大传导速度。最后,我们展示了鹌鹑胚胎心脏在发育环化阶段的高分辨率传导速度图。

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