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新种韩国芽孢杆菌:从大韩民国济州岛土壤中分离出的一种木聚糖水解细菌。

Bacillus coreaensis sp. nov.: a xylan-hydrolyzing bacterium isolated from the soil of Jeju Island, Republic of Korea.

作者信息

Chi Won-Jae, Youn Young Sang, Park Jae-Seon, Hong Soon-Kwang

机构信息

Biological and Genetic Resource Assessment Division, National Institute of Biological Resource, Incheon, 404-170, Republic of Korea.

出版信息

J Microbiol. 2015 Jul;53(7):448-53. doi: 10.1007/s12275-015-5140-2. Epub 2015 Jun 27.

Abstract

A xylan-degrading bacterium, designated as MS5(T) strain, was isolated from soil collected from the Jeju Island, Republic of Korea. Strain MS5(T) was Gram-stain-positive, aerobic, and motile by polar flagellum. The major fatty acids identified in this bacterium were iso-C15:0 (32.3%), C16:0 (27.3%), and anteiso-C15:0 (10.2%). A similarity search based on the 16S rRNA gene sequence revealed that the strain belongs to the class Bacilli and shared the highest similarity with the type strains Bacillus beringensis BR035(T) (98.7%) and Bacillus korlensis ZLC-26(T) (98.6%) which form a coherent cluster in a neighbor-joining phylogenetic tree. The DNA G+C content of strain MS5(T) was 43.0 mol%. The major menaquinone was MK-7 and the diagnostic diamino acid in the cell-wall peptidoglycan was meso-diaminopimelic acid. The DNADNA relatedness values between strain MS5(T) and two closely related species, B. beringensis BR035(T) and B. korlensis ZLC-26(T), were less than 70%. DNA-DNA relatedness analysis and 16S rRNA sequence similarity, as well as phenotypic and chemotaxonomic characteristics suggest that the strain MS5(T) constitutes a novel Bacillus species, for which the name Bacillus coreaensis sp. nov. is proposed. The type strain is MS5(T) (=DSM25506(T) =KCTC13895(T)).

摘要

从韩国济州岛采集的土壤中分离出一株木聚糖降解细菌,命名为MS5(T)菌株。MS5(T)菌株革兰氏染色阳性,好氧,具极生鞭毛,能运动。该细菌鉴定出的主要脂肪酸为异-C15:0(32.3%)、C16:0(27.3%)和anteiso-C15:0(10.2%)。基于16S rRNA基因序列的相似性搜索表明,该菌株属于芽孢杆菌纲,与贝氏芽孢杆菌BR035(T)(98.7%)和韩国芽孢杆菌ZLC-26(T)(98.6%)模式菌株的相似性最高,这两个菌株在邻接法系统发育树中形成一个连贯的簇。MS5(T)菌株的DNA G+C含量为43.0 mol%。主要甲基萘醌为MK-7,细胞壁肽聚糖中的诊断性二氨基酸为内消旋二氨基庚二酸。MS5(T)菌株与两个密切相关物种贝氏芽孢杆菌BR035(T)和韩国芽孢杆菌ZLC-26(T)之间的DNA-DNA相关性值小于70%。DNA-DNA相关性分析、16S rRNA序列相似性以及表型和化学分类特征表明,MS5(T)菌株构成一个新的芽孢杆菌物种,为此提出新名称韩国芽孢杆菌(Bacillus coreaensis sp. nov.)。模式菌株为MS5(T)(=DSM25506(T)=KCTC13895(T))。

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