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利用DNA条形码技术鉴定一种中药中使用的有蹄类动物。

Identification of ungulates used in a traditional Chinese medicine with DNA barcoding technology.

作者信息

Chen Jing, Jiang Zhigang, Li Chunlin, Ping Xiaoge, Cui Shaopeng, Tang Songhua, Chu Hongjun, Liu Binwan

机构信息

Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences Chaoyang District, No. 1 Beichen West Road, Beijing, 100101, China ; University of Chinese Academy of Sciences No. 19 (A) Yuquan Road, Beijing, 100049, China.

Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences Chaoyang District, No. 1 Beichen West Road, Beijing, 100101, China ; University of Chinese Academy of Sciences No. 19 (A) Yuquan Road, Beijing, 100049, China ; Endangered Species Scientific Commission of the People's Republic of China Chaoyang District, No. 1 Beichen West Road, Beijing, 100101, China.

出版信息

Ecol Evol. 2015 May;5(9):1818-25. doi: 10.1002/ece3.1457. Epub 2015 Apr 8.

Abstract

Horns of Saiga antelope (Saiga tatarica) have always been an ingredient of "Lingyangjiao", a traditional Chinese medicine (TCM). Persistent hunting for Saiga antelope has already threatened the survival of critical endangered populations in wild. To control the growing pressure, CITES and Chinese government have legislated for monitoring the trade of Saiga horns. However, similar ungulate horns are difficult to identify by their morphological characteristics, which has impeded the law enforcement. Besides Saiga antelope, other seven ungulate species which have similar horns are also sold and marked as "Lingyangjiao" in TCM markets to offset shortage of Saiga antelope horns. Such species are Gazella subgutturosa, Pantholops hodgsonii, Procapra picticaudata, Procapra gutturosa, Procapra przewalskii, Capra hircus, and Ovis aries. Our study aimed at implementing DNA barcoding technology to diagnose Saiga horns and the substitutes. We successfully extracted genomic DNA from horn samples. We recovered COI sequences of 644 bp with specific primers and 349 bp with nested PCR primers designed for degraded horn samples. The mean interspecific genetic distance of data set of the 644-bp full barcodes and the 349-bp mini-barcodes was 14.96% and 15.38%, respectively, and the mean intraspecific distance was 0.24% and 0.20%, respectively. Each species formed independent clades in neighbor-joining (NJ) phylogenetic tree of the two data sets with >99% supporting values, except P. gutturosa and P. przewalskii. The deep genetic distances gap and clear species clades in NJ tree of either full barcodes or mini-barcodes suggest that barcoding technology is an effective tool to diagnose Saiga horns and their substitutes. Barcoding diagnosis protocol developed here will simplify diagnosis of "Lingyangjiao" species and will facilitate conservation of endangered ungulates involved in TCM "Lingyangjiao" markets, especially the Saiga antelope.

摘要

赛加羚羊(Saiga tatarica)的角一直是传统中药“羚羊角”的成分。对赛加羚羊的持续捕猎已经威胁到野生极度濒危种群的生存。为了控制不断增加的压力,《濒危野生动植物种国际贸易公约》(CITES)和中国政府已立法对赛加羚羊角的贸易进行监管。然而,类似有蹄类动物的角很难通过其形态特征来识别,这阻碍了执法工作。除了赛加羚羊外,其他七种角相似的有蹄类动物也在中药市场上被售卖并标记为“羚羊角”,以弥补赛加羚羊角的短缺。这些物种包括鹅喉羚(Gazella subgutturosa)、藏羚羊(Pantholops hodgsonii)、藏原羚(Procapra picticaudata)、黄羊(Procapra gutturosa)、普氏原羚(Procapra przewalskii)、山羊(Capra hircus)和绵羊(Ovis aries)。我们的研究旨在应用DNA条形码技术来鉴别赛加羚羊角及其替代品。我们成功地从角样本中提取了基因组DNA。我们用特异性引物获得了644 bp的细胞色素氧化酶亚基I(COI)序列,并用为降解角样本设计的巢式PCR引物获得了349 bp的序列。644 bp完整条形码数据集和349 bp微型条形码数据集的种间平均遗传距离分别为14.96%和15.38%,种内平均距离分别为0.24%和0.20%。在两个数据集的邻接法(NJ)系统发育树中,除黄羊和普氏原羚外,每个物种都形成了独立的分支,支持值>99%。完整条形码或微型条形码的NJ树中较深的遗传距离差距和清晰的物种分支表明,条形码技术是鉴别赛加羚羊角及其替代品的有效工具。在此开发的条形码诊断方案将简化“羚羊角”物种的诊断,并将有助于保护参与中药“羚羊角”市场的濒危有蹄类动物,特别是赛加羚羊。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8063/4485963/da05f8b32e5a/ece30005-1818-f1.jpg

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