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定量氧化还原成像软件

Quantitative Redox Imaging Software.

作者信息

Fricker Mark D

机构信息

Department of Plant Sciences, University of Oxford , Oxford, United Kingdom .

出版信息

Antioxid Redox Signal. 2016 May 1;24(13):752-62. doi: 10.1089/ars.2015.6390. Epub 2015 Jul 8.

Abstract

SIGNIFICANCE

A wealth of fluorescent reporters and imaging systems are now available to characterize dynamic physiological processes in living cells with high spatiotemporal resolution. The most reliable probes for quantitative measurements show shifts in their excitation or emission spectrum, rather than just a change in intensity, as spectral shifts are independent of optical path length, illumination intensity, probe concentration, and photobleaching, and they can be easily determined by ratiometric measurements at two wavelengths.

RECENT ADVANCES

A number of ratiometric fluorescent reporters, such as reduction-oxidation-sensitive green fluorescent protein (roGFP), have been developed that respond to the glutathione redox potential and allow redox imaging in vivo. roGFP and its derivatives can be expressed in the cytoplasm or targeted to different organelles, giving fine control of measurements from sub-cellular compartments. Furthermore, roGFP can be imaged with probes for other physiological parameters, such as reactive oxygen species or mitochondrial membrane potential, to give multi-channel, multi-dimensional 4D (x,y,z,t) images.

CRITICAL ISSUES

Live cell imaging approaches are needed to capture transient or highly spatially localized physiological behavior from intact, living specimens, which are often not accessible by other biochemical or genetic means.

FUTURE DIRECTIONS

The next challenge is to be able to extract useful data rapidly from such large (GByte) images with due care given to the assumptions used during image processing. This article describes a suite of software programs, available for download, that provide intuitive user interfaces to conduct multi-channel ratio imaging, or alternative analysis methods such as pixel-population statistics or image segmentation and object-based ratio analysis. Antioxid. Redox Signal. 24, 752-762.

摘要

意义

现在有大量的荧光报告分子和成像系统可用于以高时空分辨率表征活细胞中的动态生理过程。用于定量测量的最可靠探针显示其激发或发射光谱发生位移,而不仅仅是强度变化,因为光谱位移与光程长度、照明强度、探针浓度和光漂白无关,并且可以通过双波长比率测量轻松确定。

最新进展

已经开发出许多比率荧光报告分子,例如对谷胱甘肽氧化还原电位有反应的还原氧化敏感绿色荧光蛋白(roGFP),并允许在体内进行氧化还原成像。roGFP及其衍生物可以在细胞质中表达或靶向不同的细胞器,从而可以精确控制来自亚细胞区室的测量。此外,roGFP可以与用于其他生理参数(如活性氧或线粒体膜电位)的探针一起成像,以生成多通道、多维4D(x,y,z,t)图像。

关键问题

需要活细胞成像方法来从完整的活标本中捕获瞬态或高度空间定位的生理行为,而这些行为通常无法通过其他生化或遗传手段获得。

未来方向

下一个挑战是能够在充分考虑图像处理过程中所使用假设的情况下,快速从此类大型(千兆字节)图像中提取有用数据。本文介绍了一套可供下载的软件程序,这些程序提供直观的用户界面以进行多通道比率成像,或进行诸如像素群体统计或图像分割以及基于对象的比率分析等替代分析方法。《抗氧化剂与氧化还原信号》24卷,第752 - 762页。

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