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利用16个多 locus 可变数目串联重复序列分析(MLVA-16)对哈萨克斯坦流产布鲁氏菌和羊种布鲁氏菌的遗传多样性进行研究。

Genetic diversity of Brucella abortus and Brucella melitensis in Kazakhstan using MLVA-16.

作者信息

Shevtsov Alexandr, Ramanculov Erlan, Shevtsova Elena, Kairzhanova Alma, Tarlykov Pavel, Filipenko Maxim, Dymova Maya, Abisheva Gulzada, Jailbekova Aygul, Kamalova Dinara, Chsherbakov Andrei, Tulegenov Samat, Akhmetova Assel, Sytnik Igor, Karibaev Talgat, Mukanov Kasim

机构信息

National Center for Biotechnology, 13/1 Valikhanov Str, 010000 Astana, Kazakhstan.

National Center for Biotechnology, 13/1 Valikhanov Str, 010000 Astana, Kazakhstan; School of Science and Technology, Nazarbayev University, 53 Kabanbay Batyr Ave, 010000 Astana, Kazakhstan.

出版信息

Infect Genet Evol. 2015 Aug;34:173-80. doi: 10.1016/j.meegid.2015.07.008. Epub 2015 Jul 6.

Abstract

Brucellosis is an endemic disease in Central Asia characterized by high infection rates in humans and animals. Currently, little is known about the genetic diversity of Brucella spp. circulating in the region, despite the high prevalence of brucellosis. This study aimed to analyze the genetic diversity of Brucella melitensis and Brucella abortus strains circulating in the Republic of Kazakhstan. We genotyped 128 B. melitensis and 124 B. abortus strains collected in regions with the highest prevalence of brucellosis. Genotyping was performed using multi-locus variable-number tandem-repeat analysis (MLVA). Analysis of a subset of 8 loci (MLVA-8) of 128 B. melitensis strains identified genotypes 42 (n=108), 43 (n=2), and 63 (n=19) related to the 'East Mediterranean' group. An MLVA-16 assay sorted 128 B. melitensis strains into 25 different genotypes. Excluding one variable locus, MLVA-15 of B. melitensis was distinct from strains originating in the Mediterranean region; however, 77% of them were identical to strains isolated in China. A minimum spanning tree for B. melitensis using MLVA-15 analysis clustered the local strains together with strains previously collected in China. MLVA-8 analysis of 124 B. abortus strains identified them as genotype 36, suggesting Eurasian distribution of this lineage. Complete MLVA-16 assay analysis clustered the strains into five genotypes, revealing little diversity of B. abortus when compared on the global scale. A minimum spanning tree for B. abortus obtained using MLVA-15 analysis clustered the 2 most prevalent genotypes (n=117) together with strains previously collected in China. Thus, MLVA analysis was used to characterize 252 strains of Brucella collected in Kazakhstan. The analysis revealed genetic homogeneity among the strains. Interestingly, identical MLVA-15 profiles were found in seemingly unrelated outbreaks in China, Turkey, and Kazakhstan. Further analysis is needed for better understanding of the epidemiology of brucellosis in Asia.

摘要

布鲁氏菌病是中亚的一种地方病,其特点是人和动物的感染率很高。目前,尽管布鲁氏菌病流行率很高,但对于该地区传播的布鲁氏菌属的遗传多样性了解甚少。本研究旨在分析哈萨克斯坦共和国传播的马尔他布鲁氏菌和流产布鲁氏菌菌株的遗传多样性。我们对在布鲁氏菌病流行率最高的地区收集的128株马尔他布鲁氏菌和124株流产布鲁氏菌进行了基因分型。基因分型采用多位点可变数目串联重复序列分析(MLVA)。对128株马尔他布鲁氏菌菌株的8个位点(MLVA-8)子集进行分析,确定了与“东地中海”组相关的基因型42(n=108)、43(n=2)和63(n=19)。MLVA-16分析将128株马尔他布鲁氏菌菌株分为25种不同的基因型。排除一个可变位点后,马尔他布鲁氏菌的MLVA-15与起源于地中海地区的菌株不同;然而,其中77%与在中国分离的菌株相同。使用MLVA-15分析的马尔他布鲁氏菌最小生成树将本地菌株与先前在中国收集的菌株聚集在一起。对124株流产布鲁氏菌菌株进行的MLVA-8分析确定它们为基因型36,表明该谱系在欧亚大陆分布。完整的MLVA-16分析将这些菌株分为五种基因型,在全球范围内比较时显示流产布鲁氏菌的多样性很小。使用MLVA-15分析获得的流产布鲁氏菌最小生成树将2种最常见的基因型(n=117)与先前在中国收集的菌株聚集在一起。因此,MLVA分析用于鉴定在哈萨克斯坦收集的252株布鲁氏菌菌株。分析揭示了这些菌株之间的遗传同质性。有趣的是,在中国、土耳其和哈萨克斯坦看似无关的疫情中发现了相同的MLVA-15图谱。需要进一步分析以更好地了解亚洲布鲁氏菌病的流行病学。

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