Nyström Pär, Falck-Ytter Terje, Gredebäck Gustaf
Uppsala Child & Babylab, Department of Psychology, Uppsala University, Box 1225, 751 42, Uppsala, Sweden.
Pediatric Neuropsychiatry Unit Center of Neurodevelopmental Disorders at Karolinska Institutet (KIND) and Department of Women's & Children's Health, Child and Adolescent Psychiatry Research Center, Karolinska Institutet, Stockholm, Sweden.
Behav Res Methods. 2016 Jun;48(2):542-52. doi: 10.3758/s13428-015-0616-x.
This article describes a new open source scientific workflow system, the TimeStudio Project, dedicated to the behavioral and brain sciences. The program is written in MATLAB and features a graphical user interface for the dynamic pipelining of computer algorithms developed as TimeStudio plugins. TimeStudio includes both a set of general plugins (for reading data files, modifying data structures, visualizing data structures, etc.) and a set of plugins specifically developed for the analysis of event-related eyetracking data as a proof of concept. It is possible to create custom plugins to integrate new or existing MATLAB code anywhere in a workflow, making TimeStudio a flexible workbench for organizing and performing a wide range of analyses. The system also features an integrated sharing and archiving tool for TimeStudio workflows, which can be used to share workflows both during the data analysis phase and after scientific publication. TimeStudio thus facilitates the reproduction and replication of scientific studies, increases the transparency of analyses, and reduces individual researchers' analysis workload. The project website ( http://timestudioproject.com ) contains the latest releases of TimeStudio, together with documentation and user forums.
本文介绍了一个新的开源科学工作流系统——TimeStudio项目,该项目致力于行为科学和脑科学领域。该程序用MATLAB编写,具有图形用户界面,用于对作为TimeStudio插件开发的计算机算法进行动态流水线操作。TimeStudio既包括一组通用插件(用于读取数据文件、修改数据结构、可视化数据结构等),也包括一组专门为分析与事件相关的眼动追踪数据而开发的插件,以此作为概念验证。可以创建自定义插件,以便在工作流的任何位置集成新的或现有的MATLAB代码,这使得TimeStudio成为一个灵活的工作台,可用于组织和执行广泛的分析。该系统还具有一个用于TimeStudio工作流的集成共享和存档工具,可用于在数据分析阶段和科学发表之后共享工作流。因此,TimeStudio有助于科学研究的再现和复制,提高分析的透明度,并减轻单个研究人员的分析工作量。项目网站(http://timestudioproject.com)包含TimeStudio的最新版本以及文档和用户论坛。