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使用多元学生分布对删失混合效应模型进行影响评估。

Influence assessment in censored mixed-effects models using the multivariate Student's- distribution.

作者信息

Matos Larissa A, Bandyopadhyay Dipankar, Castro Luis M, Lachos Victor H

机构信息

Departamento de Estatística, IMECC-UNICAMP, Campinas, São Paulo, Brazil.

Division of Biostatistics, University of Minnesota, Minneapolis, MN 55455.

出版信息

J Multivar Anal. 2015 Oct 1;141:104-117. doi: 10.1016/j.jmva.2015.06.014.

DOI:10.1016/j.jmva.2015.06.014
PMID:26190871
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4504025/
Abstract

In biomedical studies on HIV RNA dynamics, viral loads generate repeated measures that are often subjected to upper and lower detection limits, and hence these responses are either left- or right-censored. Linear and non-linear mixed-effects censored (LMEC/NLMEC) models are routinely used to analyse these longitudinal data, with normality assumptions for the random effects and residual errors. However, the derived inference may not be robust when these underlying normality assumptions are questionable, especially the presence of outliers and thick-tails. Motivated by this, Matos et al. (2013b) recently proposed an exact EM-type algorithm for LMEC/NLMEC models using a multivariate Student's- distribution, with closed-form expressions at the E-step. In this paper, we develop influence diagnostics for LMEC/NLMEC models using the multivariate Student's- density, based on the conditional expectation of the complete data log-likelihood. This partially eliminates the complexity associated with the approach of Cook (1977, 1986) for censored mixed-effects models. The new methodology is illustrated via an application to a longitudinal HIV dataset. In addition, a simulation study explores the accuracy of the proposed measures in detecting possible influential observations for heavy-tailed censored data under different perturbation and censoring schemes.

摘要

在关于HIV RNA动态变化的生物医学研究中,病毒载量产生了重复测量值,这些测量值常常受到检测上限和下限的影响,因此这些响应数据要么是左删失的,要么是右删失的。线性和非线性混合效应删失(LMEC/NLMEC)模型通常用于分析这些纵向数据,并对随机效应和残差误差做出正态性假设。然而,当这些潜在的正态性假设存在疑问时,尤其是存在异常值和厚尾分布时,由此得出的推断可能并不稳健。受此启发,马托斯等人(2013b)最近提出了一种用于LMEC/NLMEC模型的精确期望最大化(EM)型算法,该算法使用多元学生分布,在期望步骤有封闭形式的表达式。在本文中,我们基于完整数据对数似然的条件期望,利用多元学生密度为LMEC/NLMEC模型开发影响诊断方法。这部分消除了与库克(1977年,1986年)用于删失混合效应模型的方法相关的复杂性。通过对一个纵向HIV数据集的应用来说明这种新方法。此外,一项模拟研究探讨了所提出的测量方法在不同扰动和删失方案下检测重尾删失数据可能的影响观测值时的准确性。

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本文引用的文献

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J Comput Graph Stat. 2009;18(4):797-817. doi: 10.1198/jcgs.2009.07130.
2
Censored linear regression models for irregularly observed longitudinal data using the multivariate- t distribution.使用多元t分布对不规则观测纵向数据进行删失线性回归模型。
Stat Methods Med Res. 2017 Apr;26(2):542-566. doi: 10.1177/0962280214551191. Epub 2014 Oct 8.
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Multivariate t nonlinear mixed-effects models for multi-outcome longitudinal data with missing values.
用于具有缺失值的多结局纵向数据的多元t非线性混合效应模型。
Stat Med. 2014 Jul 30;33(17):3029-46. doi: 10.1002/sim.6144. Epub 2014 Mar 17.
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Skew-normal/independent linear mixed models for censored responses with applications to HIV viral loads.用于删失响应的偏态正态/独立线性混合模型及其在HIV病毒载量中的应用。
Biom J. 2012 May;54(3):405-25. doi: 10.1002/bimj.201000173.
5
Linear and nonlinear mixed-effects models for censored HIV viral loads using normal/independent distributions.使用正态/独立分布对截尾的HIV病毒载量进行线性和非线性混合效应模型分析。
Biometrics. 2011 Dec;67(4):1594-604. doi: 10.1111/j.1541-0420.2011.01586.x. Epub 2011 Apr 19.
6
A bayesian approach to joint mixed-effects models with a skew-normal distribution and measurement errors in covariates.一种用于具有偏态正态分布和协变量测量误差的联合混合效应模型的贝叶斯方法。
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Viral rebound and emergence of drug resistance in the absence of viral load testing: a randomized comparison between zidovudine-lamivudine plus Nevirapine and zidovudine-lamivudine plus Abacavir.在缺乏病毒载量检测的情况下,病毒反弹和耐药性的出现:齐多夫定-拉米夫定加奈韦拉平与齐多夫定-拉米夫定加阿巴卡韦的随机比较。
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Joint inference on HIV viral dynamics and immune suppression in presence of measurement errors.在存在测量误差的情况下对HIV病毒动力学和免疫抑制进行联合推断。
Biometrics. 2010 Jun;66(2):327-35. doi: 10.1111/j.1541-0420.2009.01308.x. Epub 2009 Aug 10.
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A robust approach to t linear mixed models applied to multiple sclerosis data.一种应用于多发性硬化症数据的稳健的线性混合模型方法。
Stat Med. 2006 Apr 30;25(8):1397-412. doi: 10.1002/sim.2384.
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Statistical methods for HIV dynamic studies in AIDS clinical trials.艾滋病临床试验中HIV动态研究的统计方法。
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