Suppr超能文献

使用正态/独立分布对截尾的HIV病毒载量进行线性和非线性混合效应模型分析。

Linear and nonlinear mixed-effects models for censored HIV viral loads using normal/independent distributions.

作者信息

Lachos Victor H, Bandyopadhyay Dipankar, Dey Dipak K

机构信息

Department of Statistics, Universidade Estadual de Campinas, Campinas, Sao Paulo 6065, Brazil.

出版信息

Biometrics. 2011 Dec;67(4):1594-604. doi: 10.1111/j.1541-0420.2011.01586.x. Epub 2011 Apr 19.

Abstract

HIV RNA viral load measures are often subjected to some upper and lower detection limits depending on the quantification assays. Hence, the responses are either left or right censored. Linear (and nonlinear) mixed-effects models (with modifications to accommodate censoring) are routinely used to analyze this type of data and are based on normality assumptions for the random terms. However, those analyses might not provide robust inference when the normality assumptions are questionable. In this article, we develop a Bayesian framework for censored linear (and nonlinear) models replacing the Gaussian assumptions for the random terms with normal/independent (NI) distributions. The NI is an attractive class of symmetric heavy-tailed densities that includes the normal, Student's-t, slash, and the contaminated normal distributions as special cases. The marginal likelihood is tractable (using approximations for nonlinear models) and can be used to develop Bayesian case-deletion influence diagnostics based on the Kullback-Leibler divergence. The newly developed procedures are illustrated with two HIV AIDS studies on viral loads that were initially analyzed using normal (censored) mixed-effects models, as well as simulations.

摘要

根据定量检测方法的不同,HIV RNA病毒载量检测通常会受到一些上限和下限的检测限制。因此,响应数据要么是左删失的,要么是右删失的。线性(和非线性)混合效应模型(经过修改以适应删失情况)通常用于分析这类数据,并且基于随机项的正态性假设。然而,当正态性假设存在疑问时,这些分析可能无法提供可靠的推断。在本文中,我们为删失线性(和非线性)模型开发了一个贝叶斯框架,用正态/独立(NI)分布取代随机项的高斯假设。NI是一类具有吸引力的对称重尾密度函数,包括正态分布、学生t分布、斜线分布和污染正态分布等特殊情况。边际似然是易于处理的(对于非线性模型使用近似方法),并且可用于基于库尔贝克-莱布勒散度开发贝叶斯案例删除影响诊断。新开发的程序通过两项关于病毒载量的HIV艾滋病研究以及模拟进行了说明,这两项研究最初使用正态(删失)混合效应模型进行了分析。

相似文献

1
Linear and nonlinear mixed-effects models for censored HIV viral loads using normal/independent distributions.
Biometrics. 2011 Dec;67(4):1594-604. doi: 10.1111/j.1541-0420.2011.01586.x. Epub 2011 Apr 19.
3
Quantile regression for censored mixed-effects models with applications to HIV studies.
Stat Interface. 2015;8(2):203-215. doi: 10.4310/SII.2015.v8.n2.a8.
4
Influence assessment in censored mixed-effects models using the multivariate Student's- distribution.
J Multivar Anal. 2015 Oct 1;141:104-117. doi: 10.1016/j.jmva.2015.06.014.
6
Bayesian analysis for nonlinear mixed-effects models under heavy-tailed distributions.
Pharm Stat. 2014 Jan-Feb;13(1):81-93. doi: 10.1002/pst.1598. Epub 2013 Sep 16.
7
Maximum likelihood inference for left-censored HIV RNA data.
Stat Med. 2001 Jan 15;20(1):33-45. doi: 10.1002/1097-0258(20010115)20:1<33::aid-sim640>3.0.co;2-o.
8
Bayesian semiparametric modeling for HIV longitudinal data with censoring and skewness.
Stat Methods Med Res. 2019 May;28(5):1457-1476. doi: 10.1177/0962280218760360. Epub 2018 Mar 19.
9
Bayesian inference for a nonlinear mixed-effects Tobit model with multivariate skew-t distributions: application to AIDS studies.
Int J Biostat. 2012 Sep 18;8(1):/j/ijb.2012.8.issue-1/1557-4679.1387/1557-4679.1387.xml. doi: 10.1515/1557-4679.1387.
10
Censored linear regression models for irregularly observed longitudinal data using the multivariate- t distribution.
Stat Methods Med Res. 2017 Apr;26(2):542-566. doi: 10.1177/0962280214551191. Epub 2014 Oct 8.

引用本文的文献

2
A non-parametric U-statistic testing approach for multi-arm clinical trials with multivariate longitudinal data.
J Multivar Anal. 2025 Sep;209. doi: 10.1016/j.jmva.2025.105447. Epub 2025 May 2.
3
Nonlinear mixed models and related approaches in infectious disease modeling: A systematic and critical review.
Infect Dis Model. 2024 Sep 18;10(1):110-128. doi: 10.1016/j.idm.2024.09.001. eCollection 2025 Mar.
4
Fast inference for robust nonlinear mixed-effects models.
J Appl Stat. 2022 Feb 9;50(7):1568-1591. doi: 10.1080/02664763.2022.2034141. eCollection 2023.
5
Comparison of empirical and dynamic models for HIV viral load rebound after treatment interruption.
Stat Commun Infect Dis. 2020;12(Suppl 1). doi: 10.1515/scid-2019-0021. Epub 2020 Aug 21.
6
Bayesian Hierarchical Joint Modeling Using Skew-Normal/Independent Distributions.
Commun Stat Simul Comput. 2018;47(5):1420-1438. doi: 10.1080/03610918.2017.1315730. Epub 2017 Jun 28.
7
Quantile regression for censored mixed-effects models with applications to HIV studies.
Stat Interface. 2015;8(2):203-215. doi: 10.4310/SII.2015.v8.n2.a8.
8
Robust Bayesian hierarchical model using normal/independent distributions.
Biom J. 2016 Jul;58(4):831-51. doi: 10.1002/bimj.201400255. Epub 2015 Dec 29.
9
Influence assessment in censored mixed-effects models using the multivariate Student's- distribution.
J Multivar Anal. 2015 Oct 1;141:104-117. doi: 10.1016/j.jmva.2015.06.014.

本文引用的文献

1
Fast Implementation for Normal Mixed Effects Models With Censored Response.
J Comput Graph Stat. 2009;18(4):797-817. doi: 10.1198/jcgs.2009.07130.
2
Mixed-effects state-space models for analysis of longitudinal dynamic systems.
Biometrics. 2011 Jun;67(2):476-85. doi: 10.1111/j.1541-0420.2010.01485.x. Epub 2010 Sep 3.
4
Efficient Hybrid EM for Linear and Nonlinear Mixed Effects Models with Censored Response.
Comput Stat Data Anal. 2007 Aug 15;51(12):5718-5730. doi: 10.1016/j.csda.2006.09.036.
6
A robust approach to t linear mixed models applied to multiple sclerosis data.
Stat Med. 2006 Apr 30;25(8):1397-412. doi: 10.1002/sim.2384.
7
Statistical methods for HIV dynamic studies in AIDS clinical trials.
Stat Methods Med Res. 2005 Apr;14(2):171-92. doi: 10.1191/0962280205sm390oa.
8
Analysis of left-censored longitudinal data with application to viral load in HIV infection.
Biostatistics. 2000 Dec;1(4):355-68. doi: 10.1093/biostatistics/1.4.355.
9
Commentary: practical advantages of Bayesian analysis of epidemiologic data.
Am J Epidemiol. 2001 Jun 15;153(12):1222-6. doi: 10.1093/aje/153.12.1222.
10
Mixed effects models with censored data with application to HIV RNA levels.
Biometrics. 1999 Jun;55(2):625-9. doi: 10.1111/j.0006-341x.1999.00625.x.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验