从摇蚊属物种卵块中分离得到的嗜摇蚊短膜虫AIMA4(T)（DSM 19884(T)）的高质量基因组草图序列
High quality draft genome sequence of Brachymonas chironomi AIMA4(T) (DSM 19884(T)) isolated from a Chironomus sp. egg mass.
作者信息
Laviad Sivan, Lapidus Alla, Han James, Haynes Matthew, Reddy Tbk, Huntemann Marcel, Pati Amrita, Ivanova Natalia N, Mavromatis Konstantinos, Lang Elke, Rohde Manfred, Markowitz Victor, Woyke Tanja, Klenk Hans-Peter, Kyrpides Nikos C, Halpern Malka
机构信息
Dept. of Evolutionary and Environmental Biology, Faculty of Natural Sciences, University of Haifa, Haifa, Israel.
Theodosius Dobzhansky Center for Genome Bionformatics, St. Petersburg State University, St. Petersburg, Russia ; Algorithmic Biology Lab, St. Petersburg Academic University, St. Petersburg, Russia.
出版信息
Stand Genomic Sci. 2015 May 27;10:29. doi: 10.1186/s40793-015-0010-4. eCollection 2015.
Brachymonas chironomi strain AIMA4(T) (Halpern et al., 2009) is a Gram-negative, non-motile, aerobic, chemoorganotroph bacterium. B. chironomi is a member of the Comamonadaceae, a family within the class Betaproteobacteria. This species was isolated from a chironomid (Diptera; Chironomidae) egg mass, sampled from a waste stabilization pond in northern Israel. Phylogenetic analysis based on the 16S rRNA gene sequences placed strain AIMA4(T) in the genus Brachymonas. Here we describe the features of this organism, together with the complete genome sequence and annotation. The DNA GC content is 63.5%. The chromosome length is 2,509,395 bp. It encodes 2,382 proteins and 68 RNA genes. Brachymonas chironomi genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG) project.
摇蚊短杆菌菌株AIMA4(T)（Halpern等人，2009年）是一种革兰氏阴性、无运动性、需氧的化能有机营养细菌。摇蚊短杆菌是丛毛单胞菌科的成员，丛毛单胞菌科属于β-变形菌纲。该物种是从采自以色列北部一个废水稳定塘的摇蚊（双翅目；摇蚊科）卵块中分离出来的。基于16S rRNA基因序列的系统发育分析将菌株AIMA4(T)置于短杆菌属。在此，我们描述该生物体的特征，以及完整的基因组序列和注释。DNA的GC含量为63.5%。染色体长度为2,509,395 bp。它编码2,382种蛋白质和68个RNA基因。摇蚊短杆菌基因组是类型菌株基因组百科全书第一阶段：一千个微生物基因组（KMG）项目的一部分。
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