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解淀粉欧文氏菌果聚糖蔗糖酶的晶体结构提供了一幅蔗糖水解产物被困在活性位点中的快照。

The crystal structure of Erwinia amylovora levansucrase provides a snapshot of the products of sucrose hydrolysis trapped into the active site.

作者信息

Wuerges Jochen, Caputi Lorenzo, Cianci Michele, Boivin Stephane, Meijers Rob, Benini Stefano

机构信息

Bioorganic Chemistry and Bio-Crystallography laboratory (B(2)Cl), Faculty of Science and Technology, Free University of Bolzano, 39100 Bolzano, Italy.

Department of Biological Chemistry, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, United Kingdom.

出版信息

J Struct Biol. 2015 Sep;191(3):290-8. doi: 10.1016/j.jsb.2015.07.010. Epub 2015 Jul 21.

Abstract

Levansucrases are members of the glycoside hydrolase family and catalyse both the hydrolysis of the substrate sucrose and the transfer of fructosyl units to acceptor molecules. In the presence of sufficient sucrose, this may either lead to the production of fructooligosaccharides or fructose polymers. Aim of this study is to rationalise the differences in the polymerisation properties of bacterial levansucrases and in particular to identify structural features that determine different product spectrum in the levansucrase of the Gram-negative bacterium Erwinia amylovora (Ea Lsc, EC 2.4.1.10) as compared to Gram-positive bacteria such as Bacillus subtilis levansucrase. Ea is an enterobacterial pathogen responsible for the Fire Blight disease in rosaceous plants (e.g., apple and pear) with considerable interest for the agricultural industry. The crystal structure of Ea Lsc was solved at 2.77 Å resolution and compared to those of other fructosyltransferases from Gram-positive and Gram-negative bacteria. We propose the structural features, determining the different reaction products, to reside in just a few loops at the rim of the active site funnel. Moreover we propose that loop 8 may have a role in product length determination in Gluconacetobacter diazotrophicus LsdA and Microbacterium saccharophilum FFase. The Ea Lsc structure shows for the first time the products of sucrose hydrolysis still bound in the active site.

摘要

果聚糖蔗糖酶是糖苷水解酶家族的成员,可催化底物蔗糖的水解以及果糖基单元向受体分子的转移。在有足够蔗糖存在的情况下,这可能会导致低聚果糖或果糖聚合物的产生。本研究的目的是阐明细菌果聚糖蔗糖酶聚合特性的差异,特别是确定与革兰氏阳性菌(如枯草芽孢杆菌果聚糖蔗糖酶)相比,革兰氏阴性菌解淀粉欧文氏菌(Ea Lsc,EC 2.4.1.10)的果聚糖蔗糖酶中决定不同产物谱的结构特征。欧文氏菌是一种肠道细菌病原体,会引发蔷薇科植物(如苹果和梨)的火疫病,对农业产业具有重大影响。Ea Lsc的晶体结构在2.77 Å分辨率下解析完成,并与革兰氏阳性菌和革兰氏阴性菌的其他果糖基转移酶的晶体结构进行了比较。我们认为,决定不同反应产物的结构特征仅存在于活性位点漏斗边缘的少数几个环中。此外,我们认为环8可能在重氮营养醋杆菌LsdA和嗜糖微杆菌FFase的产物长度决定中发挥作用。Ea Lsc的结构首次展示了蔗糖水解产物仍结合在活性位点上。

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