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巴西特有濒危鸟类滨海蚁鹩(蚁鸟科)微卫星标记的特征分析

Characterization of microsatellite markers for the Restinga Antwren, Formicivora littoralis (Thamnophilidae), an endangered bird endemic to Brazil.

作者信息

Chaves F G, Vecchi M B, Webster M S, Alves M A S

机构信息

Programa de Pós-Graduação em Ecologia, Instituto de Biologia Roberto Alcantara Gomes, Universidade do Estado do Rio de Janeiro, Rio de Janeiro, RJ, Brasil

Departamento de Ecologia, Universidade do Estado do Rio de Janeiro, Rio Janeiro, RJ, Brasil.

出版信息

Genet Mol Res. 2015 Jul 17;14(3):7986-9. doi: 10.4238/2015.July.17.6.

Abstract

Molecular markers are important tools in determining parentage, gene flow, and the genetic structure of species. In the case of rare, endemic, and/or threatened species, these markers can be used to understand key ecological questions and support conservation actions. We developed seven microsatellite markers for the only bird endemic to the Restinga ecosystem. Microsatellite loci were isolated from a library that was based on 10 individuals (six males and four females). Primers were tested in 107 individuals of the same population. The number of alleles per locus ranged from 4 to 19, and the observed and expected heterozygosity varied from 0.15 to 0.84 and from 0.60 to 0.89, respectively. We expect that the polymorphic microsatellite loci we describe will be useful for other studies, particularly in the Tropics.

摘要

分子标记是确定物种亲子关系、基因流动和遗传结构的重要工具。对于珍稀、特有和/或濒危物种而言,这些标记可用于理解关键的生态问题并支持保护行动。我们为里氏生态系统中唯一的特有鸟类开发了七个微卫星标记。微卫星位点是从一个基于10个个体(6只雄性和4只雌性)构建的文库中分离出来的。引物在同一群体的107个个体中进行了测试。每个位点的等位基因数量在4到19之间,观察到的杂合度和预期杂合度分别在0.15到0.84和0.60到0.89之间。我们预计,我们所描述的多态性微卫星位点将对其他研究有用,特别是在热带地区。

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