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针对水分子模型直接计算冰的均匀成核速率。

Direct calculation of ice homogeneous nucleation rate for a molecular model of water.

作者信息

Haji-Akbari Amir, Debenedetti Pablo G

机构信息

Department of Chemical and Biological Engineering, Princeton University, Princeton, NJ 08544.

Department of Chemical and Biological Engineering, Princeton University, Princeton, NJ 08544

出版信息

Proc Natl Acad Sci U S A. 2015 Aug 25;112(34):10582-8. doi: 10.1073/pnas.1509267112. Epub 2015 Aug 3.

Abstract

Ice formation is ubiquitous in nature, with important consequences in a variety of environments, including biological cells, soil, aircraft, transportation infrastructure, and atmospheric clouds. However, its intrinsic kinetics and microscopic mechanism are difficult to discern with current experiments. Molecular simulations of ice nucleation are also challenging, and direct rate calculations have only been performed for coarse-grained models of water. For molecular models, only indirect estimates have been obtained, e.g., by assuming the validity of classical nucleation theory. We use a path sampling approach to perform, to our knowledge, the first direct rate calculation of homogeneous nucleation of ice in a molecular model of water. We use TIP4P/Ice, the most accurate among existing molecular models for studying ice polymorphs. By using a novel topological approach to distinguish different polymorphs, we are able to identify a freezing mechanism that involves a competition between cubic and hexagonal ice in the early stages of nucleation. In this competition, the cubic polymorph takes over because the addition of new topological structural motifs consistent with cubic ice leads to the formation of more compact crystallites. This is not true for topological hexagonal motifs, which give rise to elongated crystallites that are not able to grow. This leads to transition states that are rich in cubic ice, and not the thermodynamically stable hexagonal polymorph. This mechanism provides a molecular explanation for the earlier experimental and computational observations of the preference for cubic ice in the literature.

摘要

冰的形成在自然界中无处不在,在包括生物细胞、土壤、飞机、交通基础设施和大气云层在内的各种环境中都有重要影响。然而,其内在动力学和微观机制目前的实验难以辨别。冰成核的分子模拟也具有挑战性,直接速率计算仅针对水的粗粒度模型进行过。对于分子模型,仅获得了间接估计值,例如通过假设经典成核理论的有效性。据我们所知,我们使用路径采样方法在水的分子模型中首次对冰的均匀成核进行直接速率计算。我们使用TIP4P/Ice,这是现有用于研究冰多晶型的分子模型中最准确的。通过使用一种新颖的拓扑方法来区分不同的多晶型,我们能够识别出一种在成核早期涉及立方冰和六方冰之间竞争的冻结机制。在这种竞争中,立方多晶型占主导,因为与立方冰一致的新拓扑结构基序的添加导致形成更紧密的微晶。对于拓扑六方基序则并非如此,它会产生无法生长的细长微晶。这导致了富含立方冰而非热力学稳定的六方多晶型的过渡态。这种机制为文献中早期关于立方冰偏好的实验和计算观察提供了分子解释。

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本文引用的文献

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