Morley Valerie J, Mendiola Sandra Y, Turner Paul E
Department of Ecology and Evolutionary Biology, Yale University, PO Box 208106, 165 Prospect Street, New Haven, CT 06520-8106, USA
Department of Ecology and Evolutionary Biology, Yale University, PO Box 208106, 165 Prospect Street, New Haven, CT 06520-8106, USA.
Proc Biol Sci. 2015 Aug 22;282(1813):20150801. doi: 10.1098/rspb.2015.0801.
Although differing rates of environmental turnover should be consequential for the dynamics of adaptive change, this idea has been rarely examined outside of theory. In particular, the importance of RNA viruses in disease emergence warrants experiments testing how differing rates of novel host invasion may impact the ability of viruses to adaptively shift onto a novel host. To test whether the rate of environmental turnover influences adaptation, we experimentally evolved 144 Sindbis virus lineages in replicated tissue-culture environments, which transitioned from being dominated by a permissive host cell type to a novel host cell type. The rate at which the novel host 'invaded' the environment varied by treatment. The fitness (growth rate) of evolved virus populations was measured on each host type, and molecular substitutions were mapped via whole genome consensus sequencing. Results showed that virus populations more consistently reached high fitness levels on the novel host when the novel host 'invaded' the environment more gradually, and gradual invasion resulted in less variable genomic outcomes. Moreover, virus populations that experienced a rapid shift onto the novel host converged upon different genotypes than populations that experienced a gradual shift onto the novel host, suggesting a strong effect of historical contingency.
尽管环境更替速率的差异理应会对适应性变化的动态过程产生影响,但这一观点在理论之外很少得到检验。特别是,RNA病毒在疾病出现中的重要性使得有必要进行实验,以测试新宿主入侵速率的差异如何影响病毒适应性转移到新宿主上的能力。为了测试环境更替速率是否影响适应性,我们在复制的组织培养环境中对144个辛德毕斯病毒谱系进行了实验进化,该环境从以一种允许的宿主细胞类型为主转变为一种新的宿主细胞类型。新宿主“入侵”环境的速率因处理方式而异。在每种宿主类型上测量进化病毒群体的适应性(生长速率),并通过全基因组一致性测序绘制分子替代图谱。结果表明,当新宿主更缓慢地“入侵”环境时,病毒群体在新宿主上更一致地达到高适应性水平,并且逐渐入侵导致基因组结果的变异性更小。此外,与逐渐转移到新宿主上的群体相比,快速转移到新宿主上的病毒群体收敛于不同的基因型,这表明历史偶然性有很强的影响。
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