Permuth-Wey Jennifer, Fulp William J, Reid Brett M, Chen Zhihua, Georgeades Christina, Cheng Jin Q, Magliocco Anthony, Chen Dung-Tsa, Lancaster Johnathan M
Department of Cancer Epidemiology, Moffitt Cancer Center, Tampa, FL.
Statistical Center for HIV/AIDS Research and Prevention (SCHARP), Fred Hutchinson Cancer Research Center, Seattle, WA.
Int J Cancer. 2016 Feb 1;138(3):612-9. doi: 10.1002/ijc.29799. Epub 2015 Aug 28.
Cancer stem cells (CSC) contribute to epithelial ovarian cancer (EOC) progression and therapeutic response. We hypothesized that germline single nucleotide polymorphisms (SNPs) in CSC-related genes may predict an initial therapeutic response for women newly diagnosed with EOC. A nested case-control design was used to study 361 women with advanced-stage serous EOC treated with surgery followed by first-line platinum-based combination therapy at Moffitt Cancer Center or as part of The Cancer Genome Atlas Study. "Cases" included 102 incomplete responders (IRs) and "controls" included 259 complete clinical responders (CRs) to therapy. Using Illumina genotyping arrays and imputation, DNA samples were evaluated for 5,509 SNPs in 24 ovarian CSC-related genes. We also evaluated the overall significance of each CSC gene using the admixture maximum likelihood (AML) test, and correlated genotype with EOC tumor tissue expression. The strongest SNP-level associations with an IR to therapy were identified for correlated (r(2) > 0.80) SNPs within signal transducer and activator of transcription 3 (STAT3) [odds ratio (OR), 2.24; 95% confidence interval (CI), 1.32-3.78; p = 0.0027], after adjustment for age, population stratification, grade and residual disease. At the gene level, STAT3 was significantly associated with an IR to therapy (pAML = 0.006). rs1053004, a STAT3 SNP in a putative miRNA-binding site, was associated with STAT3 expression (p = 0.057). This is the first study to identify germline STAT3 variants as independent predictors of an unfavorable therapeutic response for EOC patients. Findings suggest that STAT3 genotype may identify high-risk women likely to respond more favorably to novel therapeutic combinations that include STAT3 inhibitors.
癌症干细胞(CSC)促进上皮性卵巢癌(EOC)进展并影响治疗反应。我们推测,CSC相关基因中的种系单核苷酸多态性(SNP)可能预测新诊断EOC女性的初始治疗反应。采用巢式病例对照设计,对361例晚期浆液性EOC女性进行研究,这些患者在莫菲特癌症中心接受手术,随后接受一线铂类联合治疗,或作为癌症基因组图谱研究的一部分。“病例”包括102例不完全缓解者(IR),“对照”包括259例治疗后完全临床缓解者(CR)。使用Illumina基因分型阵列和填充技术,对24个卵巢CSC相关基因中的5509个SNP进行DNA样本评估。我们还使用混合最大似然(AML)检验评估每个CSC基因的总体显著性,并将基因型与EOC肿瘤组织表达相关联。在调整年龄、群体分层、分级和残留疾病后,在信号转导和转录激活因子3(STAT3)内相关性(r(2)>0.80)的SNP中,发现与治疗IR最强的SNP水平关联[比值比(OR),2.24;95%置信区间(CI),1.32 - 3.78;p = 0.0027]。在基因水平上,STAT3与治疗IR显著相关(pAML = 0.006)。rs1053004是STAT3在假定miRNA结合位点的一个SNP,与STAT3表达相关(p = 0.057)。这是第一项将种系STAT3变异鉴定为EOC患者不良治疗反应独立预测因子的研究。研究结果表明,STAT3基因型可能识别出可能对包括STAT3抑制剂的新型治疗组合反应更佳的高危女性。