Amaral Maria Rosimere Xavier, Albrecht Marc, McKinley Alan Shane, de Carvalho Adriana Márcia Ferreira, de Sousa Junior Severino Cavalcante, Diniz Fabio Mendonça
Molecular Biology & Biotechnology Laboratory, EMBRAPA Meio-Norte, CP 01, Teresina, PI 64049-550, Brazil.
Department of Biology, University of Nebraska at Kearney, Kearney, NE 68849, USA.
Molecules. 2015 Aug 19;20(8):15158-74. doi: 10.3390/molecules200815158.
The blue land crab Cardisoma guanhumi is widely distributed throughout tropical and subtropical estuarine regions in the Western Central Atlantic (WCA). Patterns of population genetic structure and historical demographics of the species were assessed by mtDNA control region sequence analysis to examine the connectivity among five populations (n = 97) within the region for future conservation strategies and decision-making of fishery management. A total of 234 polymorphic nucleotides were revealed within the sequence region, which have defined 93 distinct haplotypes. No dominant mtDNA haplotypes were found but instead a distribution of a few low-frequency recurrent haplotypes with a large number of singletons. A NJ-tree and a median-joining haplotype network revealed two distinct clusters, corresponding to individuals from estuaries located along the Caribbean Sea and Brazilian waters, respectively. AMOVA and FST statistics supported the hypothesis that two main geographic regions exists. Phylogeographical discontinuity was further demonstrated by the Bayesian assignment analysis and a significant pattern of isolation-by-distance. Additionally, tests of neutral evolution and analysis of mismatch distribution indicate a complex demographic history in the WCA, which corresponds to bottleneck and subsequent population growth. Overall, a sharp genetic break between Caribbean and Brazilian populations raised concerns over the conservation status of the blue land crab.
蓝色陆蟹(Cardisoma guanhumi)广泛分布于西大西洋中部(WCA)的热带和亚热带河口地区。通过线粒体DNA控制区序列分析评估了该物种的种群遗传结构模式和历史种群动态,以研究该区域内五个种群(n = 97)之间的连通性,为未来的保护策略和渔业管理决策提供依据。在该序列区域内共发现234个多态核苷酸,定义了93种不同的单倍型。未发现占主导地位的线粒体DNA单倍型,而是分布着一些低频重复单倍型和大量单例。一个邻接树和一个中介连接单倍型网络显示出两个不同的聚类,分别对应于来自加勒比海沿岸河口和巴西水域的个体。AMOVA和FST统计支持了存在两个主要地理区域的假设。贝叶斯分配分析和显著的距离隔离模式进一步证明了系统地理学间断。此外,中性进化检验和错配分布分析表明WCA存在复杂的种群历史,这与瓶颈效应和随后的种群增长相对应。总体而言,加勒比海和巴西种群之间明显的遗传间断引发了对蓝色陆蟹保护状况的担忧。