Fontes Fabrícia Lima, de Araújo Luíza Ferreira, Coutinho Leonam Gomes, Leib Stephen L, Agnez-Lima Lucymara Fassarella
Departamento de Biologia Celular e Genética, Universidade Federal do Rio Grande do Norte, UFRN, Natal, Brazil.
Institute for Infectious Diseases, University of Bern, Friedbuehlstrasse 51, CH-3010, Bern, Switzerland.
BMC Med Genet. 2015 Aug 28;16:70. doi: 10.1186/s12881-015-0218-6.
Bacterial meningitis (BM) is an infectious disease that results in high mortality and morbidity. Despite efficacious antibiotic therapy, neurological sequelae are often observed in patients after disease. Currently, the main challenge in BM treatment is to develop adjuvant therapies that reduce the occurrence of sequelae. In recent papers published by our group, we described the associations between the single nucleotide polymorphisms (SNPs) AADAT +401C > T, APEX1 Asn148Glu, OGG1 Ser326Cys and PARP1 Val762Ala and BM. In this study, we analyzed the associations between the SNPs TNF -308G > A, TNF -857C > T, IL-8 -251A > T and BM and investigated gene-gene interactions, including the SNPs that we published previously.
The study was conducted with 54 BM patients and 110 healthy volunteers (as the control group). The genotypes were investigated via primer-introduced restriction analysis-polymerase chain reaction (PIRA-PCR) or polymerase chain reaction-based restriction fragment length polymorphism (PCR-RFLP) analysis. Allelic and genotypic frequencies were also associated with cytokine and chemokine levels, as measured with the x-MAP method, and cell counts. We analyzed gene-gene interactions among SNPs using the generalized multifactor dimensionality reduction (GMDR) method.
We did not find significant association between the SNPs TNF -857C > T and IL-8 -251A > T and the disease. However, a higher frequency of the variant allele TNF -308A was observed in the control group, associated with changes in cytokine levels compared to individuals with wild type genotypes, suggesting a possible protective role. In addition, combined inter-gene interaction analysis indicated a significant association between certain genotypes and BM, mainly involving the alleles APEX1 148Glu, IL8 -251 T and AADAT +401 T. These genotypic combinations were shown to affect cyto/chemokine levels and cell counts in CSF samples from BM patients.
In conclusion, this study revealed a significant association between genetic variability and altered inflammatory responses, involving important pathways that are activated during BM. This knowledge may be useful for a better understanding of BM pathogenesis and the development of new therapeutic approaches.
细菌性脑膜炎(BM)是一种导致高死亡率和高发病率的传染病。尽管有有效的抗生素治疗,但疾病后患者常出现神经后遗症。目前,BM治疗的主要挑战是开发能减少后遗症发生的辅助治疗方法。在我们小组最近发表的论文中,我们描述了单核苷酸多态性(SNP)AADAT +401C>T、APEX1 Asn148Glu、OGG1 Ser326Cys和PARP1 Val762Ala与BM之间的关联。在本研究中,我们分析了SNP TNF -308G>A、TNF -857C>T、IL-8 -251A>T与BM之间的关联,并研究了基因-基因相互作用,包括我们之前发表的SNP。
该研究对54例BM患者和110名健康志愿者(作为对照组)进行。通过引物引入限制性分析-聚合酶链反应(PIRA-PCR)或基于聚合酶链反应的限制性片段长度多态性(PCR-RFLP)分析来研究基因型。等位基因和基因型频率也与用x-MAP方法测量的细胞因子和趋化因子水平以及细胞计数相关。我们使用广义多因素降维(GMDR)方法分析SNP之间的基因-基因相互作用。
我们未发现SNP TNF -857C>T和IL-8 -251A>T与该疾病之间存在显著关联。然而,在对照组中观察到变异等位基因TNF -308A的频率较高,与野生型基因型个体相比,其细胞因子水平发生了变化,提示可能具有保护作用。此外,基因间联合相互作用分析表明某些基因型与BM之间存在显著关联,主要涉及等位基因APEX1 148Glu、IL8 -251 T和AADAT +401 T。这些基因型组合显示会影响BM患者脑脊液样本中的细胞/趋化因子水平和细胞计数。
总之,本研究揭示了基因变异性与炎症反应改变之间的显著关联,涉及BM期间激活的重要途径。这些知识可能有助于更好地理解BM发病机制和开发新的治疗方法。