Suppr超能文献

酵母染色体的表面铺展与免疫染色

Surface Spreading and Immunostaining of Yeast Chromosomes.

作者信息

Grubb Jennifer, Brown M Scott, Bishop Douglas K

机构信息

Department of Radiation and Cellular Oncology, University of Chicago.

Department of Radiation and Cellular Oncology, University of Chicago; Department of Molecular Genetics and Cell Biology, University of Chicago.

出版信息

J Vis Exp. 2015 Aug 9(102):e53081. doi: 10.3791/53081.

Abstract

The small size of nuclei of the budding yeast Saccharomyces cerevisiae limits the utility of light microscopy for analysis of the subnuclear distribution of chromatin-bound proteins. Surface spreading of yeast nuclei results in expansion of chromatin without loss of bound proteins. A method for surface spreading balances fixation of DNA bound proteins with detergent treatment. The method demonstrated is slightly modified from that described by Josef Loidl and Franz Klein. The method has been used to characterize the localization of many chromatin-bound proteins at various stages of the mitotic cell cycle, but is especially useful for the study of meiotic chromosome structures such as meiotic recombinosomes and the synaptonemal complex. We also describe a modification that does not require use of Lipsol, a proprietary detergent, which was called for in the original procedure, but no longer commercially available. An immunostaining protocol that is compatible with the chromosome spreading method is also described.

摘要

出芽酵母酿酒酵母的细胞核体积小,限制了光学显微镜在分析与染色质结合蛋白的亚核分布方面的应用。酵母细胞核的表面铺展可使染色质扩张而不损失结合蛋白。一种表面铺展方法是通过洗涤剂处理平衡与DNA结合蛋白的固定。所展示的方法是对Josef Loidl和Franz Klein所描述的方法进行了轻微修改。该方法已被用于表征许多与染色质结合蛋白在有丝分裂细胞周期各个阶段的定位,但对于研究减数分裂染色体结构(如减数分裂重组体和联会复合体)特别有用。我们还描述了一种改进方法,该方法不需要使用Lipsol(一种专有洗涤剂),原始方法中需要使用该洗涤剂,但现在已不再商业化供应。还描述了一种与染色体铺展方法兼容的免疫染色方案。

相似文献

1
Surface Spreading and Immunostaining of Yeast Chromosomes.
J Vis Exp. 2015 Aug 9(102):e53081. doi: 10.3791/53081.
2
Real-time imaging of meiotic chromosomes in Saccharomyces cerevisiae.
Methods Mol Biol. 2009;558:81-9. doi: 10.1007/978-1-60761-103-5_6.
3
Analysis of Schizosaccharomyces pombe meiosis by nuclear spreading.
Methods Mol Biol. 2009;558:15-36. doi: 10.1007/978-1-60761-103-5_2.
4
Localization of RAP1 and topoisomerase II in nuclei and meiotic chromosomes of yeast.
J Cell Biol. 1992 Jun;117(5):935-48. doi: 10.1083/jcb.117.5.935.
5
Analysis of Meiotic Chromosome-Associated Protein Dynamics Using Conditional Expression in Budding Yeast.
Methods Mol Biol. 2017;1471:157-174. doi: 10.1007/978-1-4939-6340-9_8.
6
Analyzing Top2 distribution on yeast chromosomes by chromatin immunoprecipitation.
Methods Mol Biol. 2009;582:119-30. doi: 10.1007/978-1-60761-340-4_10.
7
Tying SUMO modifications to dynamic behaviors of chromosomes during meiotic prophase of Saccharomyces cerevisiae.
J Biomed Sci. 2007 Jul;14(4):481-90. doi: 10.1007/s11373-007-9176-0. Epub 2007 May 25.
8
Dynamic Live Cell Imaging of Budding Yeast Meiosis.
Methods Mol Biol. 2024;2818:161-169. doi: 10.1007/978-1-0716-3906-1_10.

引用本文的文献

1
Cellular imbalance of specific RNA-binding proteins associates with harmful R-loops.
PLoS Genet. 2025 Jul 2;21(7):e1011491. doi: 10.1371/journal.pgen.1011491. eCollection 2025 Jul.
3
Synaptonemal complex protects double-Holliday junctions during meiosis.
bioRxiv. 2024 Sep 15:2024.09.14.613089. doi: 10.1101/2024.09.14.613089.
5
Absence of chromosome axis protein recruitment prevents meiotic recombination chromosome-wide in the budding yeast .
Proc Natl Acad Sci U S A. 2024 Mar 19;121(12):e2312820121. doi: 10.1073/pnas.2312820121. Epub 2024 Mar 13.
8
Detection of RNA-DNA hybrids by immunostaining in meiotic nuclei of .
STAR Protoc. 2022 Apr 16;3(2):101325. doi: 10.1016/j.xpro.2022.101325. eCollection 2022 Jun 17.
10
The Zip4 protein directly couples meiotic crossover formation to synaptonemal complex assembly.
Genes Dev. 2022 Jan 1;36(1-2):53-69. doi: 10.1101/gad.348973.121. Epub 2021 Dec 30.

本文引用的文献

1
Meiotic crossover control by concerted action of Rad51-Dmc1 in homolog template bias and robust homeostatic regulation.
PLoS Genet. 2013;9(12):e1003978. doi: 10.1371/journal.pgen.1003978. Epub 2013 Dec 19.
2
A fast thresholded landweber algorithm for wavelet-regularized multidimensional deconvolution.
IEEE Trans Image Process. 2008 Apr;17(4):539-49. doi: 10.1109/TIP.2008.917103.
4
Assembly of RecA-like recombinases: distinct roles for mediator proteins in mitosis and meiosis.
Proc Natl Acad Sci U S A. 2001 Jul 17;98(15):8411-8. doi: 10.1073/pnas.121046198.
6
Genetic and morphological approaches for the analysis of meiotic chromosomes in yeast.
Methods Cell Biol. 1998;53:257-85. doi: 10.1016/s0091-679x(08)60882-1.
7
A meiotic recombination checkpoint controlled by mitotic checkpoint genes.
Nature. 1996 Oct 31;383(6603):840-3. doi: 10.1038/383840a0.
9
Meiotic chromosome behavior in spread preparations of yeast.
J Cell Biol. 1988 Mar;106(3):567-73. doi: 10.1083/jcb.106.3.567.
10
Meiotic chromosome synapsis in a haploid yeast.
Chromosoma. 1991 May;100(4):221-8. doi: 10.1007/BF00344155.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验