Wang Zheng, Zhu Ruxin, Zhang Suhua, Bian Yinnan, Lu Daru, Li Chengtao
Shanghai Key Laboratory of Forensic Medicine, Institute of Forensic Science, Ministry of Justice, P. R. China, Shanghai 200063, China; State Key Laboratory of Genetic Engineering, Institute of Genetics, School of Life Science, Fudan University, Shanghai 200433, China.
Shanghai Key Laboratory of Forensic Medicine, Institute of Forensic Science, Ministry of Justice, P. R. China, Shanghai 200063, China.
Anal Biochem. 2015 Dec 1;490:1-6. doi: 10.1016/j.ab.2015.08.024. Epub 2015 Aug 29.
Monozygotic (MZ) twins, considered to be genetically identical, cannot be distinguished from one another by standard forensic DNA testing. A recent study employed whole genome sequencing to identify extremely rare mutations and reported that mutation analysis could be used to differentiate between MZ twins. Compared with nuclear DNA, mitochondrial DNA (mtDNA) has higher mutation rates; therefore, minor differences theoretically exist in MZ twins' mitochondrial genome (mtGenome). However, conventional Sanger-type sequencing (STS) is neither amenable to, nor feasible for, the detection of low-level sequence variants. The recent introduction of massively parallel sequencing (MPS) has the capability to sequence many targeted regions of multiple samples simultaneously with desirable depth of coverage. Thus, the aim of this study was to assess whether full mtGenome sequencing analysis can be used to differentiate between MZ twins. Ten sets of MZ twins provided blood samples that underwent extraction, quantification, mtDNA enrichment, library preparation, and ultra-deep sequencing. Point heteroplasmies were observed in eight sets of MZ twins, and a single nucleotide variant (nt15301) was detected in five sets of MZ twins. Thus, this study demonstrates that ultra-deep mtGenome sequencing could be used to differentiate between MZ twins.
同卵双胞胎被认为基因完全相同,通过标准的法医DNA检测无法区分彼此。最近一项研究采用全基因组测序来识别极其罕见的突变,并报告称突变分析可用于区分同卵双胞胎。与核DNA相比,线粒体DNA(mtDNA)的突变率更高;因此,理论上同卵双胞胎的线粒体基因组(mtGenome)存在微小差异。然而,传统的桑格测序法(STS)既不适合也无法检测低水平的序列变异。最近引入的大规模平行测序(MPS)能够同时对多个样本的多个目标区域进行测序,并达到理想的覆盖深度。因此,本研究的目的是评估全mtGenome测序分析是否可用于区分同卵双胞胎。十对同卵双胞胎提供了血液样本,这些样本经过提取、定量、mtDNA富集、文库制备和超深度测序。在八对同卵双胞胎中观察到点异质性,在五对同卵双胞胎中检测到一个单核苷酸变异(nt15301)。因此,本研究表明超深度mtGenome测序可用于区分同卵双胞胎。