Chen Sunxiao, Yan Hongli, Zhang Lei, Kong Wei, Sun Yi, Zhang Weiwei, Chen Yan, Deng Anmei
Cell Physiol Biochem. 2015;37(2):537-47. doi: 10.1159/000430375.
BACKGROUND/AIMS: Cryptococcus neoformans infections are becoming increasingly prevalent and remain a life-threatening clinical issue in immune-compromised hosts. The microorganism evades a variety of endogenous anti-fungal mechanims of host immune cells. The signaling pathways in human immune cells that become activated in response to Cryptococcus neoformans infection have yet to be fully characterized.
Human monocytes were incubated with Cryptococcus neoformans, and the whole transcriptome of monocytes was sequenced before and after exposure to Cryptococcus neoformans using mass parallel sequencing techniques. Based on the genes that demonstrated altered expression patterns, we performed GO and KEGG enrichment analysis to further characterize the pathways involved in monocyte activation by Cryptococcus neoformans.
We found that immune and inflammatory responses, as well as chemotaxis, were the most heavily activated cellular events. Specifically, the toll-like receptor, tumor necrosis factor, NF-kB and Jak-STAT pathways were the most active pathways in response to Cryptococcus neoformans infection. The sequencing data of selected genes from the transcriptome analysis were further validated by real-time polymerase chain reactions.
Taken together, our study is the first characterization of the transcriptome alterations in human immune cells upon C. neoformans infection, providing additional information that may be helpful in discovering novel anti-fungal targets.
背景/目的:新型隐球菌感染日益普遍,在免疫功能低下的宿主中仍然是一个危及生命的临床问题。该微生物可逃避宿主免疫细胞的多种内源性抗真菌机制。人类免疫细胞中因新型隐球菌感染而被激活的信号通路尚未完全明确。
将人类单核细胞与新型隐球菌共同孵育,使用大规模平行测序技术对暴露于新型隐球菌前后的单核细胞全转录组进行测序。基于表达模式发生改变的基因,我们进行了基因本体(GO)和京都基因与基因组百科全书(KEGG)富集分析,以进一步明确新型隐球菌激活单核细胞所涉及的信号通路。
我们发现免疫和炎症反应以及趋化性是激活程度最高的细胞事件。具体而言,Toll样受体、肿瘤坏死因子、核因子κB(NF-κB)和Jak-STAT信号通路是新型隐球菌感染后最活跃的信号通路。转录组分析中选定基因的测序数据通过实时聚合酶链反应进一步得到验证。
综上所述,我们的研究首次对新型隐球菌感染后人免疫细胞转录组的变化进行了表征,提供了可能有助于发现新型抗真菌靶点的额外信息。